E. Coli Interaction Network Data
The network file has been compiled from the following sources:
- KEGG: (de)-methylation, (de)-phosphorylation, and metabolic interactions
- RegulonDB: Protein-DNA, sigma factor binding, sRNA-DNA interactions
- STRING: Protein-Protein interactions
The final sample network has 22,108 lines divided in 9 predefined interaction-types (header) and the body.
E. Coli Mutation Data
The mutation file contains the genomic information of 16 parallel evolved E. coli
The file has 2,513 lines including the header. keep in mind that there are 16 different conditions, one for each evolved population.
E. Coli Gene-Names Mapping File
The file contains the conversion ids from numerical nomenclature, to gene names.
The file has 7,816 lines including the header.