Manually Generated Interaction Networks
Salmonella typhymurium LT2
The Salmonella typhymurium LT2 interaction network is constructed using KEGG V77.0 for metabolic and signalling interactions, the STRING interaction database V10 for physical protein-protein interactions and the protein-DNA and sRNA interactions converted from RegulonDB.
The network file contains 11 interaction types (header) and 13104 connections between genes (body).
Escherichia coli K-12
This interaction network is constructed using data from the KEGG interaction database for metabolic and signalling interactions, the STRING database for protein-protein interactions and the RegulonDB for gene regulatory interactions such as protein-DNA and sRNA interactions. This network is an updated version from the original PheNetic publication (De Maeyer, 2013).
The interaction network contains 6 interaction types (header) and 18631 connections between genes (body).