PhoPQ regulated genes, differentially expressed in E. coli but not in S. typhimurium


Unique operon E. coli Motif in E. coli Motif in S. typhimurium Description Number List
yes no   Unique E. coli genes with indirect PhoP regulation 34 list
yes   Unique E. coli genes with direct PhoP regulation 11 list
no no no Indirectly PhoP regulated in E. coli and no PhoP motif found in S. typhimurium 95 list
yes Indirectly PhoP regulated in E. coli, and PhoP motif found in S. typhimurium 19 list
yes no Directly PhoP regulated in E. coli and no PhoP motif found in S. typhimurium 17 list
yes Directly PhoP regulated in E. coli and PhoP motif found in S. typhimurium 4 list


 [top] Unique E. coli genes with indirect PhoP regulation
OperonIDgeneexpressionfunctionOrthologsmotif
1850 ygeY+ b2872 o403; This 403 aa ORF is 30 pct identical (44 gaps) to 353 residues of an approx. 384 aa protein ARGE_ECOLI SW: P23908; possible frameshift at end - join to next ORF? putative deacetylase00
1346 glf+ b2036 f367; formerly designated yefE UDP-galactopyranose mutase00
rfbX0 b2037 f415; 99 pct identical to RFBX_ECOLI SW: P37746; CG Site No. 37353 putative O-antigen transporter
wbbJ0 b2033 f196; formerly designated yefH putative O-acetyl transferase
rfbC0 b2038 f185; 100 pct identical to RFBC_ECOLI SW: P37745; CG Site No. 38129 dTDP-6-deoxy-D-glucose-3,5 epimerase
wbbH0 b2035 f388; formerly designated rfc O-antigen polymerase
wbbK+ b2032 f372; formerly designated yefI putative glucose transferase
wbbI0 b2034 f330; formerly designated yefG putative Galf transferase
rfbA0 b2039 f293; 99 pct identical to RFBA_ECOLI SW: P37744; CG Site No. 297; alternate name som glucose-1-phosphate thymidylyltransferase
891 b13600 o248; This 248 aa ORF is 50 pct identical (3 gaps) to 241 residues of an approx. 248 aa protein DNAC_ECOLI SW: P07905 putative DNA replication factor00
ydaT+ b1358 o140 orf, hypothetical protein
ydaW0 b1361 o203; This 203 aa ORF is 23 pct identical (3 gaps) to 67 residues of an approx. 304 aa protein EXRN_BPT7 SW: P00638 orf, hypothetical protein
b13620 o101; This 101 aa ORF is 93 pct identical (0 gaps) to 99 residues of an approx. 160 aa protein ENPP_LAMBD SW: P00726; o203 may bebroke from o101 putative Rac prophage endopeptidase
ydaS0 b1357 o98; This 98 aa ORF is 39 pct identical (0 gaps) to41 residues of an approx. 488 aa protein COBQ_PSEDE SW: P29932 orf, hypothetical protein
ydaU0 b1359 o285; This 285 aa ORF is 35 pct identical (7 gaps) to 92 residues of an approx. 184 aa protein DNAT_ECOLI SW: P07904 orf, hypothetical protein
525 ybiA+ b0798 f160; 100 pct identical to YBIA_ECOLI SW: P30176 orf, hypothetical protein00
746 b11520 o263; 34 pct identical (11 gaps) to 248 residues from YF20_HAEIN SW: P44240 (355 aa) orf, hypothetical protein00
ymfO0 b1151 o157 orf, hypothetical protein
b11530 o194; 27 pct identical (8 gaps) to 160 residues fromYF21_HAEIN SW: P44241 (168 aa) orf, hypothetical protein
b11460 o167; phage stats orf, hypothetical protein
ymfL0 b1147 o189; phage stats; This 189 aa ORF is 30 pct identical (1 gap) to 62 residues of an approx. 728 aa protein ECHP_RAT SW:P07896 orf, hypothetical protein
ymfN0 b1149 o455; This 455 aa ORF is 36 pct identical (4 gaps) to 61 residues of an approx. 600 aa protein VG13_BPML5 SW: Q05219 orf, hypothetical protein
ycfK+ b1154 o209; 100 pct identical to 112 aa of YCFK_ECOLI SW:P45581 (125 aa) but has 97 alternate N-terminal residues orf, hypothetical protein
ymfM0 b1148 o112; This 112 aa ORF is 32 pct identical (2 gaps) to 61 residues of an approx. 296 aa protein YJO5_YEAST SW: P47008 orf, hypothetical protein
b11550 o137; residues 44-130 are 98 pct identical to aa1-87 from very hypothetical protein YZE1_ECOLI SW: P09154 (145 aa) orf, hypothetical protein
ymfR0 b1150 o60; This 60 aa ORF is 36 pct identical (3 gaps) to60 residues of an approx. 616 aa protein NUOL_ECOLI SW: P33607 orf, hypothetical protein
988 hipB+ b1508 f88; 100 pct identical to HIPB_ECOLI SW: P23873; CG Site No. 32207 persistence to inhibition of murein or DNA biosynthesis; regulatory protein00
hipA0 b1507 f440; 99 pct identical to HIPA_ECOLI SW: P23874; CG Site No. 18244 persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator
1535 b23610 o187; This 187 aa ORF is 31 pct identical (10 gaps) to 119 residues of an approx. 200 aa protein YAHC_RHOCA SW: P42506 orf, hypothetical protein00
b2362+ o120; This 120 aa ORF is 28 pct identical (5 gaps) to 59 residues of an approx. 672 aa protein INV1_MAIZE SW: P49175 orf, hypothetical protein
b23630 o101; This 101 aa ORF is 35 pct identical (0 gaps) to 42 residues of an approx. 1824 aa protein YM68_CAEEL SW: P34529 orf, hypothetical protein
2109 yhdZ0 b3271 o252; 100 pct identical amino acid sequence and equal length to YHDZ_ECOLI SW: P45769 putative ATP-binding component of a transport system00
yhdY+ b3270 o368; 100 pct identical amino acid sequence and equal length to YHDY_ECOLI SW: P45768 putative transport system permease protein
2622 yjcR+ b4082 f343; 100 pct identical to YJCR_ECOLI SW: P32716;similar to E. coli multidrug resistance protein A putative membrane protein00
2233 yhiD+ b3508 f215; 100 pct identical amino acid sequence and equal length to YHID_ECOLI SW: P26606 putative transport ATPase00
622 ycbM+ b0934 f278; This 253 aa ORF is 47 pct identical (0 gaps) to 242 residues of an approx. 280 aa protein YZEB_BACSU SW: P40401 putative transport system permease protein00
ycbN0 b0935 f381; This 381 aa ORF is 64 pct identical (2 gaps) to 371 residues of an approx. 376 aa protein YZEC_BACSU SW: P40402 orf, hypothetical protein
ycbP0 b0937 f191; This 191 aa ORF is 30 pct identical (7 gaps) to 130 residues of an approx. 192 aa protein YIEF_ECOLI SW: P31465 orf, hypothetical protein
ycbE0 b0933 f255; 95 pct identical to fragment YCBE_ECOLI SW:P38053 but contains 165 additional N-terminal aa putative ATP-binding component of a transport system
ycbO0 b0936 f333; This 333 aa ORF is 32 pct identical (6 gaps) to 280 residues of an approx. 336 aa protein YZEA_BACSU SW: P40400 orf, hypothetical protein
1834 yqeK+ b2849 f145; 100 pct identical to GB: ECU83187 Accession U83187 but contains 17 additional N-term residues orf, hypothetical protein00
2771 yjhH0 b4298 f319; 100 pct identical amino acid sequence and equal length to YJHH_ECOLI SW: P39359 putative lyase*synthase00
yjhI0 b4299 f262a; 100 pct identical amino acid sequence and equal length to YJHI_ECOLI SW: P39360 putative regulator
yjhG+ b4297 f655; 99 pct identical to YJHG_ECOLI SW: P39358 putative dehydratase
224 lacY+ b0343 f417; 100 pct identical to LACY_ECOLI SW: P02920 galactoside permease (M protein)00
954 b1455+ o70; residues 3-45 are 23 pct identical to aa428-470 from GB: FIU22008_1 Accession U22008 (693 aa) an NADH dehydrogenase orf, hypothetical protein00
234 yaiP+ b0363 f398; This 398 aa ORF is 30 pct identical (4 gaps) to 113 residues of an approx. 184 aa protein YHET_ANASP SW: P22639 polysaccharide metabolism00
b03620 f128; This 116 aa ORF is 44 pct identical (3 gaps) to 45 residues of an approx. 344 aa protein LPXD_HAEIN SW: P43888 orf, hypothetical protein
2629 phnM0 b4095 f378; 100 pct identical amino acid sequence and equal length to PHNM_ECOLI SW: P16689 phosphonate metabolism00
phnN0 b4094 f185; 100 pct identical amino acid sequence and equal length to PHNN_ECOLI SW: P16690 ATP-binding component of phosphonate transport
phnO0 b4093 f144; 100 pct identical amino acid sequence and equal length to PHNO_ECOLI SW: P16691 putative regulator, phn operon
phnL+ b4096 f226; 100 pct identical amino acid sequence and equal length to PHNL_ECOLI SW: P16679 ATP-binding component of phosphonate transport
phnP0 b4092 f252; 100 pct identical amino acid sequence and equal length to PHNP_ECOLI SW: P16692 phosphonate metabolism
754 ycgZ+ b1164 o78; This 78 aa ORF is 31 pct identical (4 gaps) to61 residues of an approx. 184 aa protein NUPM_NEUCR SW: P21976 orf, hypothetical protein00
1037 dicB0 b1575 o62; 98 pct identical to DICB_ECOLI SW: P09557; CG Site No. 18424 inhibition of cell division00
ydfD+ b1576 o63; 100 pct identical to YDFD_ECOLI SW: P29010; alternate name orf5 of X07465 orf, hypothetical protein
1848 ygeW+ b2870 o363; This 363 aa ORF is 27 pct identical (43 gaps) to 342 residues of an approx. 336 aa protein OTCC_NEIGO SW: P21302; UUG start;possible frameshift at end? putative carbamoyl transferase00
1784 b27720 f264; This 264 aa ORF is 28 pct identical (3 gaps) to 70 residues of an approx. 424 aa protein YMD2_CAEEL SW: P34456 orf, hypothetical protein00
ygcQ+ b2769 f297; This 297 aa ORF is 35 pct identical (6 gaps) to 210 residues of an approx. 336 aa protein ETFA_HUMAN SW: P13804 putative flavoprotein
ygcU0 b2773 f218; sequence change joins 2 ORFs from earlierversion putative oxidoreductase subunit
ygcR0 b2770 f261; C-terminal differs from earlier version; this261 aa ORF is 26 pct identical (2 gaps) to 153 residues of the 252 aa protein ETFB_PARDE SW: P38975 putative transport protein
ygcS0 b2771 f469; This 469 aa ORF is 26 pct identical (26 gaps) to 420 residues of an approx. 456 aa protein YYAJ_BACSU SW: P37514 putative transport protein
1212 b1826+ f47; This 47 aa ORF is 34 pct identical (3 gaps) to43 residues of an approx. 176 aa protein MRED_BACSU SW: Q01467 orf, hypothetical protein00
1477 yfbL+ b2271 o325; This 325 aa ORF is 28 pct identical (17 gaps) to 203 residues of an approx. 512 aa protein AMPX_VIBPR SW: Q01693 putative aminopeptidase00
467 ybfK+ b0693a Uncharacterized protein00
87 yadK0 b0136 f198; 100 pct identical to YADK_ECOLI SW: P37016 putative fimbrial protein00
yadM0 b0138 f203; 100 pct identical to YADM_ECOLI SW: P37018(189 aa) but contains 14 additional N-term residues putative fimbrial-like protein
ecpD0 b0140 f246; 98 pct identical to ECPD_ECOLI SW: P33128 probable pilin chaperone similar to PapD
yadL+ b0137 f201; 100 pct identical to YADL_ECOLI SW: P37017 putative fimbrial protein
htrE0 b0139 f865; 99 pct identical to HTRE_ECOLI SW: P33129 probable outer membrane porin protein involved in fimbrial assembly
931 b1425+ f67; This 67 aa ORF is 34 pct identical (3 gaps) to67 residues of an approx. 696 aa protein VGLH_HSV6G SW: P30001 orf, hypothetical protein00
2128 yheJ0 b3332 o327; 100 pct identical amino acid sequence and equal length to GSPK_ECOLI SW: P45762 putative export protein J for general secretion pathway (GSP)00
hofH0 b3329 o169; 100 pct identical amino acid sequence and equal length to GSPH_ECOLI SW: P41443 putative general protein secretion protein
yheI0 b3331 o195; 100 pct identical amino acid sequence and equal length to GSPJ_ECOLI SW: P45761 putative export protein I for general secretion pathway (GSP)
yheG0 b3326 o493; 100 pct identical amino acid sequence and equal length to GSPE_ECOLI SW: P45759 putative general secretion pathway for protein export (GSP) (TYPE II TRAFFIC WARDEN ATPASE)
yheF0 b3325 o654; 100 pct identical amino acid sequence and equal length to GSPD_ECOLI SW: P45758 putative general protein secretion protein
hofD0 b3335 o225; 98 pct identical amino acid sequence and equal length to LEP3_ECOLI SW: P25960 leader peptidase, integral membrane protein
hofF0 b3327 o398; 100 pct identical amino acid sequence and equal length to GSPF_ECOLI SW: P41441 putative general protein secretion protein
hofG+ b3328 o145; 100 pct identical amino acid sequence and equal length to GSPG_ECOLI SW: P41442 putative general protein secretion protein
yheE0 b3324 o271; 100 pct identical amino acid sequence and equal length to GSPC_ECOLI SW: P45757 putative general secretion pathway for protein export (GSP)
pshM0 b3334 o161; 100 pct identical amino acid sequence and equal length to GSPM_ECOLI SW: P36678 putative general secretion
yheK0 b3333 o388; 100 pct identical amino acid sequence and equal length to GSPL_ECOLI SW: P45763 putative general protein secretion protein
yheH0 b3330 o138; 100 pct identical amino acid sequence and equal length to GSPI_ECOLI SW: P45760 putative export protein for general secretion pathway (GSP)
365 ybcO0 b0549 o96; This 96 aa ORF is 36 pct identical (5 gaps) to 65 residues of an approx. 1336 aa protein XDH_RAT SW: P22985 orf, hypothetical protein00
ninE0 b0548 o56; This 56 aa ORF is 47 pct identical (1 gap) to 36 residues of an approx. 64 aa protein Y60_LAMBD SW: P03768 similar to phage 82 and lambda proteins
rus+ b0550 o120; This 120 aa ORF is 36 pct identical (5 gaps) to 58 residues of an approx. 288 aa protein YRJ2_STRCO SW: P41109 endodeoxyribonuclease RUS (Holliday junction resolvase)
ybcN0 b0547 o151; This 151 aa ORF is 21 pct identical (3 gaps) to 109 residues of an approx. 2040 aa protein FAS1_CANAL SW: P34731 orf, hypothetical protein
1092 lhr+ b1653 o1538; 100 pct identical to LHR_ECOLI SW: P30015; CG Site No. 35720 member of ATP-dependent helicase superfamily II00
2153 yhfQ0 b3374 o261; 100 pct identical amino acid sequence and equal length to YHFQ_ECOLI SW: P45543 putative kinase00
yhfP+ b3373 o134; sequence change alters C-term relative toearlier version; N-terminal 118 aa are 100 pct identical to N-terminal of YHFP_ECOLI SW: P45542 orf, hypothetical protein
yhfR0 b3375 o265; o265; gtg start; 100 pct identical amino acidsequence and equal length to YHFR_ECOLI SW: P45544 putative transcriptional regulator
2524 yijI+ b3948 o109; 100 pct identical amino acid sequence and equal length to YIJI_ECOLI SW: P32671 orf, hypothetical protein00
22 ileS0 b0026 o938; 100 pct identical to SYI_ECOLI SW: P00956; alternate gene name ilvS isoleucine tRNA synthetase00
lspA+ b0027 o164; 100 pct identical to LSPA_ECOLI SW: P00804 prolipoprotein signal peptidase (SPase II)
235 yaiS+ b0364 f136 orf, hypothetical protein00
2630 phnK0 b4097 f252; 99 pct identical amino acid sequence and equal length to PHNK_ECOLI SW: P16678 ATP-binding component of phosphonate transport00
phnI0 b4099 f354; 100 pct identical amino acid sequence and equal length to PHNI_ECOLI SW: P16687 phosphonate metabolism
phnH0 b4100 f194 phosphonate metabolism
phnF0 b4102 f241; 100 pct identical amino acid sequence and equal length to PHNF_ECOLI SW: P16684 putative transcriptional regulator
b41030 f73; 98 pct identical to 73 C-terminal residues ofPHNE_ECOLI SW: P16683 (276 aa) from E. coli Strain B orf, hypothetical protein
phnE+ b4104 f206; This 206 aa ORF is 100 pct identical (0 gaps) to 157 residues of a 276 aa protein PHNE_ECOLI SW: P16683 from E. coli Strain B membrane channel protein component of Pn transporter
phnJ0 b4098 f281; 100 pct identical amino acid sequence and equal length to PHNJ_ECOLI SW: P16688 phosphonate metabolism
phnG0 b4101 f150; 100 pct identical amino acid sequence and equal length to PHNG_ECOLI SW: P16685 phosphonate metabolism

 [top] Unique E. coli genes with direct PhoP regulation
OperonIDgeneexpressionfunctionOrthologsmotif
882 ydaC+ b1347 f69; 100 pct identical to 62 aa fragment YDAC_ECOLISW: P33230, has 7 additional C-terminal residues orf, hypothetical protein00
lar0 b1348 f64; 100 pct identical LAR_ECOLI SW: P33229 restriction alleviation and modification enhancement
667 b10120 f382; This 382 aa ORF is 23 pct identical (14 gaps) to 295 residues of an approx. 376 aa protein YZEC_BACSU SW: P40402 orf, hypothetical protein00
b10100 f128; residues 3-119 are 35 pct identical to aa3-119 from YVN1_AZOVI SW: P40431 orf, hypothetical protein
b10090 f266; This 266 aa ORF is 38 pct identical (3 gaps) to 104 residues of an approx. 376 aa protein ACOC_ALCEU SW: P27747 putative acetyltransferase
b1008+ f196; This 196 aa ORF is 26 pct identical (25 gaps) to 159 residues of an approx. 224 aa protein NFNB_ENTCL SW: Q01234 putative enzyme
b1011+ f244; This 244 aa ORF is 25 pct identical (17 gaps) to 203 residues of an approx. 272 aa protein CSH_ARTSP SW: P32400 putative synthetase
2522 yijF+ b3944 f205; 100 pct identical amino acid sequence and equal length to YIJF_ECOLI SW: P32668 orf, hypothetical protein00
1870 ygfF+ b2902 f247; 100 pct identical to fragment YGFF_ECOLI SW:P52037 (97 aa) but contains 150 additional C-terminal residues putative oxidoreductase00
1816 ppdC0 b2823 f107; 100 pct identical to PPDC_ECOLI SW: P08372; alternate name URF3; ORF of X03966 prepilin peptidase dependent protein C00
ppdB+ b2825 f187; 100 pct identical to PPDB_ECOLI SW: P08371; alternate name URF1; ORF of X03966 prepilin peptidase dependent protein B
ppdA0 b2826 f156; 99 pct identical to PPDA_ECOLI SW: P33554 prepilin peptidase dependent protein A
ygdB0 b2824 f121; 100 pct identical to YGDB_ECOLI SW: P08370; alternate name ygdB, URF2; ORF of X03966; 2nd start orf, hypothetical protein
recC0 b2822 f1122; 100 pct identical to EX5C_ECOLI SW: P07648;CG Site No. 310 DNA helicase, ATP-dependent dsDNA*ssDNA exonuclease V subunit, ssDNA endonuclease
369 ybcU+ b0557 f97; 96 pct identical amino acid sequence and equal length to VBOR_LAMBD SW: P26814 bacteriophage lambda Bor protein homolog00
1466 ais+ b2252 f200; 100 pct identical to AIS_ECOLI SW: P45565; GTGstart protein induced by aluminum00
2621 yjcQ+ b4081 f636; 100 pct identical to YJCQ_ECOLI SW: P32715;similar to Neurospora crassa phosphate-repressible phosphate permease putative enzyme00
yjcP0 b4080 f488; 99 pct identical to YJCP_ECOLI SW: P32714;matches PS00443: Glutamine amidotransferases class-II active site; similar toPseudomonas cepacia fusaric acid resistance protein FusA putative enzyme
2079 yhcL+ b3227 o455; 100 pct identical amino acid sequence and equal length to YHCL_ECOLI SW: P45428 putative transport protein00
2482 yiiE+ b3889 o81; 100 pct identical amino acid sequence and equal length to YIIE_ECOLI SW: P32149 orf, hypothetical protein00
2719 ytfR0 b4228 o417a; 100 pct identical amino acid sequence and equal length to YTFR_ECOLI SW: P39326 putative ATP-binding component of a transport system00
ytfS0 b4229 o90b; 100 pct identical amino acid sequence and equal length to YTFS_ECOLI SW: P39327 putative ATP-binding component of a transport system
yjfF+ b4231 o323; 100 pct identical amino acid sequence and equal length to YJFF_ECOLI SW: P37772 putative transport system permease protein
ytfT0 b4230 o341; 100 pct identical amino acid sequence and equal length to YTFT_ECOLI SW: P39328 putative transport system permease protein

 [top] Indirectly PhoP regulated in E. coli and no PhoP motif found in S. typhimurium
OperonIDgeneexpressionfunctionOrthologsmotif
2527 yijO+ b3954 f283; 100 pct identical to YIJO_ECOLI SW: P32677;matches PS00041: Bacterial regulatory proteins, araC family signature; similarto members of the AraC family of positive transcriptional regulators putative ARAC-type regulatory protein26920
331 ybbM0 b0491 o268; This 268 aa ORF is 27 pct identical (9 gaps) to 113 residues of an approx. 344 aa protein HAIR_DROME SW: P14003 putative metal resistance protein3420
ybbL+ b0490 o225; This 225 aa ORF is 32 pct identical (7 gaps) to 210 residues of an approx. 384 aa protein POTA_HAEIN SW: P45171 putative ATP-binding component of a transport system
2177 yhgKJ+ b3419m RNA phosphate cyclase22930
rtcB0 b3421 f408; formerly designated yhgL orf, hypothetical protein
580 ybjD+ b0876 o552; This 552 aa ORF is 28 pct identical (9 gaps) to 191 residues of an approx. 592 aa protein VOLD_BPP2 SW: P13520 orf, hypothetical protein6140
2723 pmbA+ b4235 o450; 100 pct identical amino acid sequence and equal length to PMBA_ECOLI SW: P24231 maturation of antibiotic MccB17, see tld genes29100
1902 yggU+ b2953 o100; This 100 aa ORF is 23 pct identical (3 gaps) to 94 residues of an approx. 1128 aa protein CYGS_STRPU SW: P16065 orf, hypothetical protein20320
yggS0 b2951 o234; This 234 aa ORF is 55 pct identical (6 gaps) to 231 residues of an approx. 232 aa protein YPT5_PSEAE SW: P24562 orf, hypothetical protein
yggW0 b2955 o378; This 378 aa ORF is 67 pct identical (4 gaps) to 378 residues of an approx. 384 aa protein HEMN_HAEIN SW: P43899 putative oxidase
yggV0 b2954 o197; Residues 2-187 are 57 pct identical toresidues 3-188 of PIR: D64146 (195 aa), a hypothetical H. influenzae protein putative ribosomal protein
yggT0 b2952 o188; This 188 aa ORF is 40 pct identical (2 gaps) to 173 residues of an approx. 192 aa protein YA36_HAEIN SW: P44097 putative resistance protein
220 codB0 b0336 o419; 100 pct identical to CODB_ECOLI SW: P25525 cytosine permease*transport21870
codA+ b0337 o427; 100 pct identical to CODA_ECOLI SW: P25524 but includes initator met (GTG start codon) cytosine deaminase
454 nagB+ b0678 f266; 100 pct identical to NAGB_ECOLI SW: P09375 glucosamine-6-phosphate deaminase4520
1754 srlR0 b2707 o257; 100 pct identical to SRLR_ECOLI SW: P15082; CG Site No. 152; alternate gene name gutR regulator for gut (srl), glucitol operon18780
gutQ+ b2708 o308; 100 pct identical to GB: ECU29579_4 ACCESSION:U29579; residues 1-200 are 100 pct identical to aa 1-200 from GUTQ_ECOLI SW:P17115 (223 aa); alternate gene name srlQ orf, hypothetical protein
1109 pykF+ b1676 o470; residues 1-450 are 100 pct identical toKPY1_ECOLI SW: P14178 (462 aa) but differs at C-term; CG Site No. 17620; alternate name PK-1 pyruvate kinase I (formerly F), fructose stimulated9290
2731 pyrL0 b4246 f44; 100 pct identical amino acid sequence and equal length to LPPY_ECOLI SW: P09150 pyrBI operon leader peptide29240
pyrI+ b4244 f153; 100 pct identical to PYRI_ECOLI SW: P00478; CG Site No. 323 aspartate carbamoyltransferase, regulatory subunit
pyrB+ b4245 f311; 99 pct identical amino acid sequence and equal length to PYRB_ECOLI SW: P00479; CG Site No. 330 aspartate carbamoyltransferase, catalytic subunit
yjgF0 b4243 f141; 100 pct identical to 127 amino acids of YJGF_ECOLI SW: P39330 but has 14 additional N-ter residues orf, hypothetical protein
2320 dut0 b3640 o151; 100 pct identical amino acid sequence and equal length to DUT_ECOLI SW: P06968 deoxyuridinetriphosphatase24400
dfp+ b3639 o430; 100 pct identical amino acid sequence and equal length to DFP_ECOLI SW: P24285 flavoprotein affecting synthesis of DNA and pantothenate metabolism
2726 nrdD+ b4238 f712; 99 pct identical amino acid sequence and equal length to NRDD_ECOLI SW: P28903 anaerobic ribonucleoside-triphosphate reductase29170
2703 ytfE+ b4209 f220 orf, hypothetical protein28780
2586 malE+ b4034 f396; CG Site No. 532 periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis27620
707 flgB0 b1073 o138; 81 pct identical to FLGB_SALTY SW: P16437 but includes initiator met flagellar biosynthesis, cell-proximal portion of basal-body rod7830
flgE+ b1076 o402; 86 pct identical (1 gap) to FLGE_SALTY SW:P16322 but includes initiator met flagellar biosynthesis, hook protein
flgF+ b1077 o251; 86 pct identical to FLGF_SALTY SW: P16323 flagellar biosynthesis, cell-proximal portion of basal-body rod
flgC0 b1074 o134; 93 pct identical to FLGC_SALTY SW: P16438 flagellar biosynthesis, cell-proximal portion of basal-body rod
flgD0 b1075 o231; 83 pct identical (1 gap) to PIR: S47641,Salmonella typhimurium flgD flagellar biosynthesis, initiation of hook assembly
2075 yhcH+ b3221 f154 orf, hypothetical protein21880
yhcJ+ b3223 f229 putative enzyme
yhcI0 b3222 f302; 100 pct identical amino acid sequence and equal length to YHCI_ECOLI SW: P45425 putative NAGC-like transcriptional regulator
2531 argC0 b3958 o334; 100 pct identical to ARGC_ECOLI SW: P11446; CG Site No. 1019 N-acetyl-gamma-glutamylphosphate reductase26960
argB+ b3959 o258; CG Site No. 1020 acetylglutamate kinase
1929 hybC0 b2994 f567; 100 pct identical to MBHM_ECOLI SW: P37181; CG Site No. 33418 probable large subunit, hydrogenase-220600
hybG+ b2990 f82; 100 pct identical to HYBG_ECOLI SW: P37185; CG Site No. 33403 hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2
hybD0 b2993 f164; 100 pct identical to 159 aa of HYBD_ECOLI SW:P37182 (162 aa) but has alternate 6 aa C-terminus; CG Site No. 33421 probable processing element for hydrogenase-2
hybF0 b2991 f113; 100 pct identical to PIR: F55516; CG Site No.33427; translation of an alternate overlapping reading frame produces a 103 aa protein that is 100 pct identical to HYBF_ECOLI SW: P37184 may modulate levels of hydrogenease-2
b29970 f372; This 372 aa ORF is 40 pct identical (12 gaps) to 359 residues of an approx. 360 aa protein MBHS_AZOVI SW: P21950 putative hydrogenase subunit
hybA0 b2996 f328; 100 pct identical to MBHT_ECOLI SW: P37179; CG Site No. 33407 hydrogenase-2 small subunit
hybE0 b2992 f162; 99 pct identical to HYBE_ECOLI SW: P37183; CG Site No. 33424 member of hyb operon
hybB0 b2995 f392; 100 pct identical to HYBB_ECOLI SW: P37180; CG Site No. 33414 probable cytochrome Ni*Fe component of hydrogenase-2
2245 yhjC+ b3521 o323; 100 pct identical amino acid sequence and equal length to YHJC_ECOLI SW: P37641 putative transcriptional regulator LYSR-type23590
346 ylbE0 b0519 o333 was o419; This 419 aa ORF is 26 pct identical (3 gaps) to 132 residues of an approx. 280 aa protein DCOP_PENCH SW: P09463 orf, hypothetical protein3600
arcC0 b0521 o297; formerly designated ybcF putative carbamate kinase (EC 2.7.2.2)
ylbF+ b0520 o271; o271; internal frameshift; This 271 aa ORF is 25 pct identical (9 gaps) to 103 residues of an approx. 968 aa proteinCAP1_FLATR SW: Q01648 putative carboxylase
548 moeA+ b0827 f411; 100 pct identical to MOEA_ECOLI SW: P12281 molybdopterin biosynthesis5540
moeB0 b0826 f249; 100 pct identical to MOEB_ECOLI SW: P12282 molybdopterin biosynthesis
2125 rplO0 b3301 f144; CG Site No. 251; 99 pct identical amino acidsequence and equal length to RL15_ECOLI SW: P02413 50S ribosomal subunit protein L1522390
rpmJ0 b3299 f38; CG Site No. 17599; 100 pct identical amino acidsequence and equal length to RL36_ECOLI SW: P21194 50S ribosomal subunit protein L36
rpmD0 b3302 f59; CG Site No. 238; 100 pct identical amino acidsequence and equal length to RL30_ECOLI SW: P02430 50S ribosomal subunit protein L30
rplN0 b3310 f123; CG Site No. 252; 100 pct identical amino acidsequence and equal length to RL14_ECOLI SW: P02411 50S ribosomal subunit protein L14
prlA0 b3300 f443; 100 pct identical amino acid sequence and equal length to SECY_ECOLI SW: P03844 putative ATPase subunit of translocase
rplF0 b3305 f177; CG Site No. 258 50S ribosomal subunit protein L6
rpsE0 b3303 f167; CG Site No. 226; alternate names eps, spcA,spc 30S ribosomal subunit protein S5
rplX0 b3309 f104; CG Site No. 243; 100 pct identical amino acidsequence and equal length to RL24_ECOLI SW: P02425 50S ribosomal subunit protein L24
rpsN0 b3307 f101; CG Site No. 218; 100 pct identical amino acidsequence and equal length to RS14_ECOLI SW: P02370 30S ribosomal subunit protein S14
rplE0 b3308 f179; CG Site No. 259; 100 pct identical amino acidsequence and equal length to RL5_ECOLI SW: P02389 50S ribosomal subunit protein L5
rplR0 b3304 f117; CG Site No. 248; 100 pct identical amino acidsequence and equal length to RL18_ECOLI SW: P02419 50S ribosomal subunit protein L18
rpsH+ b3306 f130; CG Site No. 223; 100 pct identical amino acidsequence and equal length to RS8_ECOLI SW: P02361 30S ribosomal subunit protein S8, and regulator
1274 fliD+ b1924 o468; 99 pct to FLID_ECOLI SW: P24216; CG Site No.748; alternate name flbC, flaV flagellar biosynthesis; filament capping protein; enables filament assembly13450
fliT0 b1926 o121; 100 pct identical to FLIT_ECOLI SW: P26610; CG Site No. 30739 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)
fliS0 b1925 o136; 100 pct identical to FLIS_ECOLI SW: P26608; CG Site No. 30736 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)
2415 gppA+ b3779 f494; 100 pct identical to GPPA_ECOLI SW: P25552 guanosine pentaphosphatase; exopolyphosphatase25610
739 icdA+ b1136 o416; 100 pct identical to IDH_ECOLI SW: P08200 isocitrate dehydrogenase, specific for NADP+8160
2843 rob+ b4396 f289; 100 pct identical to ROB_ECOLI SW: P27292 right origin-binding protein30150
1763 hypD+ b2729 o373; 99 pct identical to HYPD_ECOLI SW: P24192; CG Site no. 33116 pleiotrophic effects on 3 hydrogenase isozymes18860
hypB0 b2727 o290; 99 pct identical amino acid sequence and equal length to HYPB_ECOLI SW: P24190; CG Site no. 33110 guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3
hypE0 b2730 o322; 99 pct identical to HYPE_ECOLI SW: P24193; CG Site no. 33119 plays structural role in maturation of all 3 hydrogenases
hypC0 b2728 o90; 100 pct identical to HYPC_ECOLI SW: P24191; CG Site no. 33113 pleiotrophic effects on 3 hydrogenase isozymes
hypA0 b2726 o116; 100 pct identical to HYPA_ECOLI SW: P24189; CG Site no. 33104 pleiotrophic effects on 3 hydrogenase isozymes
664 yccJ0 b1003 f75; 100 pct identical to YCCJ_ECOLI SW: P46131 orf, hypothetical protein7400
wrbA+ b1004 f198; 99 pct identical to WRBA_ECOLI SW: P30849 trp repressor binding protein; affects association of trp repressor and operator
2587 malK+ b4035 o371; 99 pct identical amino acid sequence and equal length to MALK_ECOLI SW: P02914; CG Site No. 529 ATP-binding component of transport system for maltose27630
1518 b23340 f162 orf, hypothetical protein1240
yfcS+ b2336 f250; This 250 aa ORF is 43 pct identical (2 gaps) to 221 residues of an approx. 240 aa protein PAPD_ECOLI SW: P15319 putative chaperone
b23330 f179; This 179 aa ORF is 33 pct identical (7 gaps) to 171 residues of an approx. 184 aa protein FIMF_ECOLI SW: P08189 putative fimbrial-like protein
b23320 f278; This 278 aa ORF is 35 pct identical (5 gaps) to 67 residues of an approx. 1888 aa protein POL2_TRSVR SW: P25247 orf, hypothetical protein
b23350 f170; This 170 aa ORF is 27 pct identical (12 gaps) to 125 residues of an approx. 168 aa protein PRSF_ECOLI SW: P42187 putative fimbrial protein
yfcU0 b2338m PapC-like porin protein involved in fimbrial biogenesis
834 topA+ b1274 o865; 100 pct identical to TOP1_ECOLI SW: P06612; CG Site No. 89; alternate name supX DNA topoisomerase type I, omega protein11670
1456 yfaE0 b2236 o84; 98 pct identical to YFAE_ECOLI SW: P37910 orf, hypothetical protein15170
nrdB+ b2235 o376; 100 pct identical to RIR2_ECOLI SW: P00453 but includes initiator met; alternate gene name ftsB ribonucleoside-diphosphate reductase 1, beta subunit, B2
594 dmsC0 b0896 o287; 100 pct identical to DMSC_ECOLI SW: P18777 anaerobic dimethyl sulfoxide reductase subunit C6320
dmsB+ b0895 o205; 100 pct identical (2 gaps) to 204 residues ofDMSB_ECOLI SW: P18776 (206 aa) and includes initiator met anaerobic dimethyl sulfoxide reductase subunit B
dmsA+ b0894 o785; 100 pct identical to DMSA_ECOLI SW: P18775 anaerobic dimethyl sulfoxide reductase subunit A
2060 yrbE0 b3194 f260; 100 pct identical amino acid sequence and equal length to YRBE_ECOLI SW: P45392 orf, hypothetical protein21760
yrbB0 b3191 f129; 100 pct identical amino acid sequence and equal length to YRBB_ECOLI SW: P45389 orf, hypothetical protein
yrbC+ b3192 f211; 100 pct identical amino acid sequence and equal length to YRBC_ECOLI SW: P45390 orf, hypothetical protein
yrbF0 b3195 f269 putative ATP-binding component of a transport system
yrbD0 b3193 f183 orf, hypothetical protein
1551 b2389+ o418 was o397; This 397 aa ORF is 26 pct identical (28 gaps) to 284 residues of an approx. 488 aa protein CMCT_NOCLA SW: Q04733 orf, hypothetical protein15970
617 aspC+ b0928 f396; 100 pct identical to AAT_ECOLI SW: P00509 aspartate aminotransferase6560
1635 yfhJ0 b2524 f66; 100 pct identical to YFHJ_ECOLI SW: P37096 orf, hypothetical protein16900
hscA+ b2526 f616; 98 pct identical (1 gap) to HSCA_ECOLI SW:P36541; 100 pct identical to known strain B variant heat shock protein, chaperone, member of Hsp70 protein family
yfhE0 b2527 f171; 100 pct identical to YFHE_ECOLI SW: P36540 orf, hypothetical protein
fdx0 b2525 f111; 100 pct identical to FER_ECOLI SW: P25528 [2FE-2S] ferredoxin, electron carrer protein
23 lytB+ b0029 o316; 100 pct identical to LYTB_ECOLI SW: P22565 control of stringent response; involved in penicillin tolerance350
slpA0 b0028 o149; 100 pct identical to FKBX_ECOLI SW: P22563 probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase)
96 hemL+ b0154 f426; 99 pct identical to GSA_ECOLI SW: P23893; alternate gene names popC, gsa glutamate-1-semialdehyde aminotransferase (aminomutase)1250
1613 perM+ b2493 f353; This 353 aa ORF is 69 pct identical (0 gaps) to 142 residues of an approx. 152 aa protein Y238_HAEIN SW: P43970 putative permease16560
355 fimZ+ b0535 f210; 100 pct identical to FIMZ_ECOLI SW: P21502 fimbrial Z protein; probable signal transducer3690
2339 yicO+ b3664 f470; 100 pct identical amino acid sequence and equal length to YICO_ECOLI SW: P31440 orf, hypothetical protein25200
yicN0 b3663 f159; 100 pct identical amino acid sequence and equal length to YICN_ECOLI SW: P31439 orf, hypothetical protein
681 ycdX+ b1034 o245 orf, hypothetical protein7550
ycdY0 b1035 o184; This 184 aa ORF is 40 pct identical (12 gaps) to 181 residues of an approx. 192 aa protein YF43_HAEIN SW: P44248 putative oxidoreductase component
2555 thiF0 b3992 f245; This 245 aa ORF is 100 pct identical to 245residues of a 251 aa protein THIF_ECOLI SW: P30138 but contains -6 additional N-ter aa and about 0 C-ter residues thiamin biosynthesis, thiazole moiety27240
thiE0 b3993 f211; 100 pct identical amino acid sequence and equal length to THIE_ECOLI SW: P30137 thiamin biosynthesis, thiazole moiety
thiH0 b3990 f377; 100 pct identical amino acid sequence and equal length to THIH_ECOLI SW: P30140 thiamin biosynthesis, thiazole moiety
thiS+ thiS Sulfur transfer protein involved in thiamine biosynthesis
thiC0 b3994 f631; 100 pct identical to THIC_ECOLI SW: P30136; CG Site No. 115 thiamin biosynthesis, pyrimidine moiety
thiG0 b3991 f281; This 281 aa ORF is 99 pct identical to 281residues of a 324 aa protein THIG_ECOLI SW: P30139 but contains -43 additional N-ter aa and about 0 C-ter residues thiamin biosynthesis, thiazole moiety
1484 nuoG+ b2283 f910; This 910 aa ORF is 97 pct identical (2 gaps) to 731 residues of an approx. 824 aa protein NUOG_ECOLI SW: P33602 NADH dehydrogenase I chain G15400
nuoL0 b2278 f613; 97 pct identical to NUOL_ECOLI SW: P33607 NADH dehydrogenase I chain L
nuoH+ b2282 f325; 99 pct identical to NUOH_ECOLI SW: P33603 NADH dehydrogenase I chain H
nuoK+ b2279 f100; This 100 aa ORF is 84 pct identical (1 gap) to100 residues of an approx. 104 aa protein NUOK_ECOLI SW: P33606 NADH dehydrogenase I chain K
nuoI0 b2281 f180; 90 pct identical (1 gap) to 180 residues of a179 aa protein NUOI_ECOLI SW: P33604 NADH dehydrogenase I chain I
nuoJ0 b2280 f184; 98 pct identical to NUOJ_ECOLI SW: P33605 NADH dehydrogenase I chain J
2105 acrF0 b3266 o1034; alternate name envD, has different start annotated; 99 pct identical amino acid sequence and equal length to ACRF_ECOLISW: P24181 integral transmembrane protein; acridine resistance22230
acrE+ b3265 o385; alternate name envC; 100 pct identical aminoacid sequence and equal length to ACRE_ECOLI SW: P24180 transmembrane protein affects septum formation and cell membrane permeability
523 b07950 f332; This 332 aa ORF is 30 pct identical (7 gaps) to 294 residues of an approx. 360 aa protein YHII_ECOLI SW: P37626 putative membrane protein5320
ybhR+ b0792 f368; This 368 aa ORF is 22 pct identical (5 gaps) to 365 residues of an approx. 656 aa protein YHIG_ECOLI SW: P37624 orf, hypothetical protein
ybhF0 b0794 f583; This 583 aa ORF is 44 pct identical (7 gaps) to 252 residues of an approx. 656 aa protein YHIG_ECOLI SW: P37624 putative ATP-binding component of a transport system
ybiH0 b0796 f227; 100 pct identical to 103 residues of fragmentYBIH_ECOLI SW: P41037 (103 aa) but contains 4 additional N-ter aa and 120 C-terresidues putative transcriptional regulator
ybhS0 b0793 f377; This 377 aa ORF is 31 pct identical (8 gaps) to 370 residues of an approx. 656 aa protein YHIG_ECOLI SW: P37624 orf, hypothetical protein
453 nagC0 b0676 f406; 99 pct identical to NAGC_ECOLI SW: P15301 transcriptional repressor of nag (N-acetylglucosamine) operon4510
nagA+ b0677 f382; 100 pct identical to NAGA_ECOLI SW: P15300 N-acetylglucosamine-6-phosphate deacetylase
526 ybiB0 b0800 o320; 99 pct identical to YBIB_ECOLI SW: P30177 putative enzyme5350
dinG+ b0799 o716; 100 pct identical to DING_ECOLI SW: P27296 probably ATP-dependent helicase
1623 guaA+ b2507 f525; 100 pct identical to GUAA_ECOLI SW: P04079 GMP synthetase (glutamine-hydrolyzing)16700
2838 yjjK+ b4391 f555; sequence change shortens and changesC-terminus relative to earlier version (YJJK_ECOLI SW: P37797); extends similarity to homologue YJJK_HAEIN putative ATP-binding component of a transport system30100
1757 hypF+ b2712 f750; 96 pct identical (1 gap) to HYPF_ECOLI SW:P30131; all differences are clustered in run from aa 367-388; CG Site No. 18232; alternate gene name hypF transcriptional regulatory protein18810
2612 yjcE+ b4065 o549b; 100 pct identical to YJCE_ECOLI SW: P32703;similar to eukaryotic Na+*H+ exchangers orf, hypothetical protein27910
533 ybiO+ b0808 f786; This 786 aa ORF is 26 pct identical (13 gaps) to 266 residues of an approx. 288 aa protein YGGB_ECOLI SW: P11666 putative transport protein5390
2636 basR0 b4113 f222; 99 pct identical amino acid sequence and equal length to BASR_ECOLI SW: P30843 transcriptional regulatory protein, member of 2-component regulatory system,28060
yjdB+ b4114 f557; 100 pct identical to 547 amino acids of YJDB_ECOLI SW: P30845 but has 10 additional N-ter residues orf, hypothetical protein
basS0 b4112 f363; 100 pct identical amino acid sequence and equal length to BASS_ECOLI SW: P30844 sensor protein for basR
1251 cheW+ b1887 f167; 100 pct identical to CHEW_ECOLI SW: P07365; CG Site No. 925 positive regulator of CheA protein activity13160
motB0 b1889 f308; 100 pct identical to MOTB_ECOLI SW: P09349; CG Site No. 490; alternate name flaJ enables flagellar motor rotation, linking torque machinery to cell wall
motA0 b1890 f295; 100 pct identical to MOTA_ECOLI SW: P09348; CG Site No. 491; alternate name flaJ proton conductor component of motor; no effect on switching
cheA+ b1888 f654; 99 pct identical to CHEA_ECOLI SW: P07363 sensory transducer kinase between chemo- signal receptors and CheB and CheY
277 ispA+ b0421 f299; 100 pct identical to ISPA_ECOLI SW: P22939 geranyltranstransferase (farnesyldiphosphate synthase)2790
xseB0 b0422 f80; 100 pct identical to EX7S_ECOLI SW: P22938 exonuclease VII, small subunit
dxs0 b0420 f620; 73 pct identical (4 gaps) to 620 residues of YE39_HAEIN SW: P45205 (625 aa) 1-deoxyxylulose-5-phosphate synthase; flavoprotein
2169 feoA+ b3408 o75; CG Site No. 28964; 100 pct identical amino acidsequence and equal length to FEOA_ECOLI SW: P33649 ferrous iron transport protein A22840
yhgG0 b3410 o78; 100 pct identical amino acid sequence and equal length to YHGG_ECOLI SW: P46845 orf, hypothetical protein
feoB+ b3409 o773; CG Site No. 28967; 99 pct identical amino acidsequence and equal length to FEOB_ECOLI SW: P33650 ferrous iron transport protein B
604 serC+ b0907 o362; 99 pct identical to SERC_ECOLI SW: P23721 3-phosphoserine aminotransferase6420
2149 nirD0 b3366 o108; 100 pct identical amino acid sequence and equal length to NIRD_ECOLI SW: P23675 nitrite reductase (NAD(P)H) subunit22650
nirB+ b3365 o847; CG Site No. 451; alternate name nirD; sequence difference extends our end; 100 pct identical amino acid sequence and equal length to NIRB_ECOLI SW: P08201 nitrite reductase (NAD(P)H) subunit
1511 pdxB+ b2320 f378; 100 pct identical to PDXB_ECOLI SW: P05459 erythronate-4-phosphate dehyrogenase15720
438 ybeX+ b0658 f292; This 292 aa ORF is 23 pct identical (9 gaps) to 272 residues of an approx. 440 aa protein YTFL_HAEIN SW: P44717 putative transport protein4410
lnt+ b0657 f512; 100 pct identical to LNT_ECOLI SW: P23930; alternate gene name cutE apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane
1624 guaB+ b2508 f488; 99 pct identical to IMP_ECOLI SW: P06981 IMP dehydrogenase16710
2287 yiaO+ b3579 o328; 100 pct identical amino acid sequence and equal length to YIAO_ECOLI SW: P37676 putative solute-binding transport protein24060
sgbH0 b3581 o220; formerly designated yiaQ probable 3-hexulose 6-phosphate synthase
lyxK0 b3580 o498; 100 pct identical amino acid sequence and equal length to LYXK_ECOLI SW: P37677 L-xylulose kinase, cryptic
sgbE0 b3583 o231; formerly designated yiaS putative epimerase*aldolase
yiaM0 b3577 o157a; 100 pct identical amino acid sequence and equal length to YIAM_ECOLI SW: P37674 orf, hypothetical protein
yiaN0 b3578 o424; 100 pct identical amino acid sequence and equal length to YIAN_ECOLI SW: P37675 putative membrane protein
sgbU0 b3582 o297; formerly designated yiaR probable 3-hexulose-6-phosphate isomerase
1538 emrK+ b2368 f387; 100 pct identical to 387 residues from EMRK_ECOLI SW: P52599 (593 aa) but is missing 6 N-term residues; SW: P52599 isa conceptual translation containing an introduced frameshift multidrug resistance protein K18610
emrY0 b2367 f512; 100 pct identical to EMRY_ECOLI SW: P52600 multidrug resistance protein Y
482 b07250 o86; This 86 aa ORF is 33 pct identical (4 gaps) to63 residues of an approx. 1256 aa protein MUC1_HUMAN SW: P15941 orf, hypothetical protein4860
sucA0 b0726 o933; 99 pct identical to ODO1_ECOLI SW: P07015 2-oxoglutarate dehydrogenase (decarboxylase component)
sucB+ b0727 o405; 100 pct identical to ODO2_ECOLI SW: P07016 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component)
2168 yhgF+ b3407 o740; 100 pct identical to 740 aa conceptualtranslation YHGF_ECOLI SW: P46837 orf, hypothetical protein22830
593 serS+ b0893 o430; 100 pct identical to SYS_ECOLI SW: P09156 serine tRNA synthetase; also charges selenocystein tRNA with serine6310
1483 nuoM+ b2277 f509; 99 pct identical to NUOM_ECOLI SW: P31978 NADH dehydrogenase I chain M15390
2384 atpG+ b3733 f287; 100 pct identical to ATPG_ECOLI SW: P00837; alternate gene names uncG, papC; CG Site No. 27 membrane-bound ATP synthase, F1 sector, gamma-subunit25310
atpD+ b3732 f460; 100 pct identical to ATPB_ECOLI SW: P00824; alternate gene names uncD, papB; CG Site No. 30 membrane-bound ATP synthase, F1 sector, beta-subunit
atpC0 b3731 f139; 100 pct identical to ATPE_ECOLI SW: P00832; alternate gene names uncC, papG; CG Site No. 31 membrane-bound ATP synthase, F1 sector, epsilon-subunit
2146 yhfG+ b3362 f55; 100 pct identical amino acid sequence and equal length to YHFG_ECOLI SW: P37770 orf, hypothetical protein22620
pabA0 b3360 f187; CG Site No.429; 100 pct identical amino acidsequence and equal length to PABA_ECOLI SW: P00903 p-aminobenzoate synthetase, component II
fic0 b3361 f200; CG Site No. 18361; filamentation in presenceof cyclic AMP in mutant; 100 pct identical amino acid sequence and equal lengthto FIC_ECOLI SW: P20605 induced in stationary phase, recognized by rpoS, affects cell division
1485 nuoC+ b2286 f600; Residues 1-174 are 100 pct identical toNUOC_ECOLI SW: P33599 (183 aa); Residues 194-600 are 99 pct identical to NUOD_ECOLI SW: P33600; frameshift relative to database merges two genes NADH dehydrogenase I chain C, D15400
nuoF+ b2284 f445; 99 pct identical to NUOF_ECOLI SW: P31979 NADH dehydrogenase I chain F
nuoE0 b2285 f166; 99 pct identical to NUOE_ECOLI SW: P33601 NADH dehydrogenase I chain E
738 purB+ b1131 f456; 99 pct identical to PUR8_ECOLI SW: P25739 adenylosuccinate lyase8140
b11340 f153; This 153 aa ORF is 45 pct identical (3 gaps) to 57 residues of an approx. 160 aa protein MUTT_STRAM SW: P32091 putative phosphohydrolase
ycfB0 b1133 f383; 100 pct identical to fragment YCFB_ECOLI SW:P25745 but has 152 additional N-terminal residues orf, hypothetical protein
ymfC0 b1135 f207; This 207 aa ORF is 66 pct identical (1 gap) to175 residues of an approx. 248 aa protein Y694_HAEIN SW: P44827 orf, hypothetical protein
ycfC0 b1132 f213; 99 pct identical to YCFC_ECOLI SW: P25746 orf, hypothetical protein
120 yaeB0 b0195 f235; 100 pct identical to YAEB_ECOLI SW: P28634 orf, hypothetical protein1500
rcsF+ b0196 f134; 97 pct identical (1 gap) to RCSF_ECOLI SW:P28633 regulator in colanic acid synthesis; interacts with RcsB
283 ampG+ b0433 f491; 100 pct identical to AMPG_ECOLI SW: P36670 regulates beta-lactamase synthesis2920
2588 lamB+ b4036 o446; 99 pct identical amino acid sequence and equal length to LAMB_ECOLI SW: P02943; CG Site No. 575 phage lambda receptor protein; maltose high-affinity receptor27640
581 ybjX+ b0877 f330; This 330 aa ORF is 21 pct identical (10 gaps) to 194 residues of an approx. 232 aa protein LAPB_PASHA SW: P32181 putative enzyme6150
2727 treC+ b4239 f551; 100 pct identical amino acid sequence and equal length to TREC_ECOLI SW: P28904 trehalase 6-P hydrolase29180
2313 rfaF0 b3620 o348; 100 pct identical amino acid sequence and equal length to RFAF_ECOLI SW: P37692 ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis24310
rfaC0 b3621 o319; 100 pct identical to RFAC_ECOLI SW: P24173; CG Site No. 300; alternate gene name rfa2 heptosyl transferase I; lipopolysaccharide core biosynthesis
rfaD+ b3619 o310; 100 pct identical to RFAD_ECOLI SW: P17963; alternate gene name htrM; CG Site No. 299 ADP-L-glycero-D-mannoheptose-6-epimerase
rfaL0 b3622 o419; 94 pct identical amino acid sequence and equal length to RFAL_ECOLI SW: P27243 O-antigen ligase; lipopolysaccharide core biosynthesis
1512 div+ b2321 o331; 100 pct identical to fragment DIV_ECOLI SW:P15286 (39 aa) but contains 292 additional C-term resiudes cell division protein15730
1526 yfdC+ b2347 o310; 100 pct identical to YFDC_ECOLI SW: P37327 putative transport15880
2442 yigL+ b3826m Predicted hydrolase (HAD superfamily)25880
pldB0 b3825 o340; 99 pct identical amino acid sequence and equal length to PLDB_ECOLI SW: P07000 lysophospholipase L(2)
2498 pfkA+ b3916 o320; 98 pct identical amino acid sequence and equal length to K6P1_ECOLI SW: P06998; CG Site No. 413 6-phosphofructokinase I26530
2104 envR+ b3264 f220; 100 pct identical amino acid sequence and equal length to ENVR_ECOLI SW: P31676 putative transcriptional regulator22220
269 tgt0 b0406 o375; 99 pct identical to TGT_ECOLI SW: P19675 tRNA-guanine transglycosylase2690
yajC+ b0407 o110; 100 pct identical to YAJC_ECOLI SW: P19677 orf, hypothetical protein
secD0 b0408 o615; 99 pct identical to SECD_ECOLI SW: P19673 protein secretion; membrane protein, part of the channel
secF0 b0409 o323; 100 pct identical to SECF_ECOLI SW: P19674 protein secretion, membrane protein
158 phoE+ b0241 f351; 100 pct identical to PHOE_ECOLI SW: P02932 outer membrane pore protein E (E,Ic,NmpAB)2050
2277 xylA+ b3565 f440; 100 pct identical to XYLA_ECOLI SW: P00944; CG Site No. 5 D-xylose isomerase23980
1752 srlE0 b2703 o319; frameshift disrupts match to PTHB_ECOLI SW:P05705; CG Site No. 155; alternate gene names gutA, sbl PTS system, glucitol*sorbitol-specific IIB component and second of two IIC components18760
srlA0 b2702 o187; frameshift disrupts match to PTHB_ECOLI SW:P05705; CG Site No. 155; alternate gene names gutA, sbl PTS system, glucitol*sorbitol-specific IIC component, one of two
srlD+ b2705 o259; 99 pct identical to SRLD_ECOLI SW: P05707; CG Site No. 153; alternate gene name gutD glucitol (sorbitol)-6-phosphate dehydrogenase
srlB+ b2704 o123; 100 pct identical to PTHA_ECOLI SW: P05706; CG Site No. 11886; alternate gene name gutB PTS system, glucitol*sorbitol-specific enzyme IIA component
1064 ydgA+ b1614 o502; This 502 aa ORF is 35 pct identical (20 gaps) to 477 residues of an approx. 496 aa protein YIHF_ECOLI SW: P32128 orf, hypothetical protein9780
799 narK+ b1223 o465; 100 pct identical to NARK_ECOLI SW: P10903 nitrite extrusion protein12010
85 panB+ b0134 f264; 100 pct identical to PANB_ECOLI SW: P31057 3-methyl-2-oxobutanoatehydroxymethyltransferase1150
panC0 b0133 f283; 100 pct identical to PANC_ECOLI SW: P31663 pantothenate synthetase
1774 pcm0 b2743 f208; 100 pct identical to PIMT_ECOLI SW: P24206 but includes initiator met; CG Site No. 33221 L-isoaspartate protein carboxylmethyltransferase type II19160
ygbO+ b2745 f349; was f292 and f255 before splice; This 349 aa ORF is 44 pct identical (8 gaps) to 338 residues of an approx. 344 aa proteinY701_HAEIN SW: P44039 putative hydrogenase subunit
surE0 b2744 f253; 100 pct identical to PIR: I69732; alternate name ygbC; ORF1 of L07942, has different start due to frameshift in L07942 survival protein
b27480 f103; This 103 aa ORF is 42 pct identical (0 gaps) to 91 residues of an approx. 96 aa protein Y673_HAEIN SW: P44035 orf, hypothetical protein
ygbB0 b2746 f159; 100 pct identical to YGBB_ECOLI SW: P36663;ORF0 of L07942 orf, hypothetical protein
ygbP0 b2747 f236; This 236 aa ORF is 36 pct identical (7 gaps) to 215 residues of an approx. 240 aa protein YACM_BACSU SW: Q06755 orf, hypothetical protein
2263 yiaC0 b3550 o146b; 100 pct identical amino acid sequence and equal length to YIAC_ECOLI SW: P37664 orf, hypothetical protein23820
tag+ b3549 o187; 100 pct identical to 3MG1_ECOLI SW: P05100; CG Site No. 124 3-methyl-adenine DNA glycosylase I, constitutive
2669 frdC0 b4152 f131; 100 pct identical to FRDC_ECOLI SW: P03805; CG Site No. 740 fumarate reductase, anaerobic, membrane anchor polypeptide28420
frdD0 b4151 f119; 100 pct identical to FRDD_ECOLI SW: P03806; CG Site No. 739 fumarate reductase, anaerobic, membrane anchor polypeptide
frdA+ b4154 f602; 100 pct identical to FRDA_ECOLI SW: P00363; CG Site No. 742 fumarate reductase, anaerobic, flavoprotein subunit
frdB0 b4153 f244; 100 pct identical to FRDB_ECOLI SW: P00364; CG Site No. 741 fumarate reductase, anaerobic, iron-sulfur protein subunit

 [top] Indirectly PhoP regulated in E. coli, and PhoP motif found in S. typhimurium
OperonIDgeneexpressionfunctionOrthologsmotif
2687 yjfC0 b4186 o387; 100 pct identical amino acid sequence and equal length to YJFC_ECOLI SW: P33222 putative synthetase*amidase28621
yjfK+ b4183 o219; 100 pct identical amino acid sequence and equal length to YJFK_ECOLI SW: P39293 orf, hypothetical protein
yjfM0 b4185 o212; 100 pct identical amino acid sequence and equal length to YJFM_ECOLI SW: P39295 orf, hypothetical protein
yjfL0 b4184 o132; 100 pct identical amino acid sequence and equal length to YJFL_ECOLI SW: P39294 orf, hypothetical protein
1619 ppk0 b2501 o688; 100 pct identical to PPK_ECOLI SW: P28688 but includes initiator met polyphosphate kinase16621
ppx+ b2502 o513; 100 pct identical to PPX_ECOLI SW: P29014 but includes initiator met exopolyphosphatase
557 ybjG+ b0841 f198; This 198 aa ORF is 31 pct identical (4 gaps) to 179 residues of an approx. 208 aa protein BCRC_BACLI SW: P42334 orf, hypothetical protein5681
1597 b24620 f135 orf, hypothetical protein16391
eutI+ b2458 f338; 91 pct identical to 242 residues of fragmentEUTI_SALTY SW: P41790 ethanolamine utilization; homolog of Salmonella acetyl*butyryl P transferase
b24610 f159 was f126; This 126 aa ORF is 33 pct identical (8 gaps) to 90 residues of an approx. 456 aa protein AK3_ECOLI SW: P08660 orf, hypothetical protein
b24590 f267; This 267 aa ORF is 30 pct identical (4 gaps) to 72 residues of an approx. 344 aa protein TISB_RAT SW: P17431 orf, hypothetical protein
cchA+ b2457 f111; 96 pct identical to CCHA_SALTY SW: P41791 detox protein
b24600 f233; This 233 aa ORF is 23 pct identical (2 gaps) to 71 residues of an approx. 272 aa protein LCRF_YERPE SW: P28808 orf, hypothetical protein
413 citC0 b0618 f381; This 381 aa ORF is 53 pct identical (2 gaps) to 328 residues of an approx. 336 aa protein CITC_HAEIN SW: P44462 citrate lyase synthetase (citrate (pro-3S)-lyase ligase4141
citF+ b0615 f510 was f195; This 195 aa ORF is 74 pct identical (0 gaps) to 154 residues of an approx. 504 aa protein CILA_HAEIN SW: P44459 citrate lyase alpha chain
citG0 b0613 f292; This 292 aa ORF is 51 pct identical (1 gap) to264 residues of an approx. 304 aa protein CITG_KLEPN SW: P45414 orf, hypothetical protein
ybdU0 b0614 f183; This 183 aa ORF is 33 pct identical (0 gaps) to 130 residues of an approx. 424 aa protein CITG_HAEIN SW: P44458 orf, hypothetical protein
citD0 b0617 f98; residues 9-86 are 51 pct identical to 9-86 from CILG_KLEPN SW: P02903 (97 aa) a citrate lyase acyl carrier protein citrate lyase acyl carrier protein (gamma chain)
citE0 b0616 f307; This 307 aa ORF is 76 pct identical (1 gap) to 291 residues of an approx. 296 aa protein CILB_HAEIN SW: P44460 citrate lyase beta chain (acyl lyase subunit)
1041 speG+ b1584 o186; 100 pct identical to ATDA_ECOLI SW: P37354 spermidine N1-acetyltransferase10071
b15830 o113; This 113 aa ORF is 27 pct identical (2 gaps) to 81 residues of an approx. 496 aa protein CD4X_HUMAN SW: P22511 orf, hypothetical protein
427 phpB0 b0638 f203 was f204; 100 pct identical to PHPB_ECOLI SW:P52086; similar to Salmonella typhimurium CobC homolog of Salmonella cobC, a phosphohistidine protein4301
holA0 b0640 f343; 100 pct identical to HOLA_ECOLI SW: P28630 DNA polymerase III, delta subunit
rlpB0 b0641 f193; 99 pct identical to RLPB_ECOLI SW: P10101 a minor lipoprotein
ybeN0 b0639 f213; This 213 aa ORF is 36 pct identical (2 gaps) to 41 residues of an approx. 160 aa protein KDTB_HAEIN SW: P44805 orf, hypothetical protein
leuS+ b0642 f860; 99 pct identical to SYL_ECOLI SW: P07813 leucine tRNA synthetase
1516 aroC+ b2329 f361; 100 pct identical AROC_ECOLI SW: P12008 but includes initiator met chorismate synthase15811
yfcB0 b2330 f421; 100 pct identical to fragment YFCB_ECOLI SW:P39199 (152 aa) but contains 269 additional N-term residues putative adenine-specific methylase
b2325+ f92; This 92 aa ORF is 31 pct identical (4 gaps) to67 residues of an approx. 624 aa protein UL32_HSVEB SW: P28952 orf, hypothetical protein
yfcA0 b2327 f269; 100 pct identical to YFCA_ECOLI SW: P14008 putative structural protein
b23260 f182; 54 pct identical (1 gap) to 165 residues fromYF63_HAEIN SW: P44255 (178 aa) putative transporting ATPase
mepA0 b2328 f274; 100 pct identical to MEPA_ECOLI SW: P14007 murein DD-endopeptidase, penicillin-insensitive
970 sfcA+ b1479 f574; 100 pct identical to fragment SFCA_ECOLI SW:P26616 (438 aa) but contains 136 additional C-ter residues; CG Site No.32176; alternate name maeA NAD-linked malate dehydrogenase (malic enzyme)10531
1470 menC+ b2261 f320; This 320 aa ORF is 99 pct identical (2 gaps) a318 aa protein MENC_ECOLI SW: P29208 o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA15311
menD0 b2264 f556; 96 pct identical (1 gap) to 542 residues MEND_ECOLI SW: P17109 (551 aa) but differs at C-terminus 2-oxoglutarate decarboxylase; SHCHC synthase
menE0 b2260 f451; 99 pct identical to MENE_ECOLI SW: P37353 o-succinylbenzoate-CoA ligase
yfbB+ b2263 f252; 97 pct identical (0 gaps) to 149 residues of YFBB_ECOLI SW: P37355 (240 aa) but differs at the C-terminus putative enzyme
menB0 b2262 f285; 100 pct identical to MENB_ECOLI SW: P27290 dihydroxynaphtoic acid synthetase
26 carA+ b0032 o382; 100 pct identical to CARA_ECOLI SW: P00907;TTG start carbamoyl-phosphate synthetase, glutamine (small) subunit431
carB0 b0033 o1073; 100 pct identical to CARB_ECOLI SW: P00968 carbamoyl-phosphate synthase large subunit
1460 glpC+ b2243 o396; 99 pct identical GLPC_ECOLI SW: P13034 sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit15211
glpA0 b2241 o542; 99 pct identical to GLPA_ECOLI SW: P13032 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit
glpB+ b2242 o419; 99 pct identical to GLPB_ECOLI SW: P13033 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit
1755 ygaA+ b2709 f529; joins 2 ORFs from earlier version; now identical to YGAA_ECOLI SW: P37013 putative 2-component transcriptional regulator18791
2255 yhjS0 b3536 o523; 100 pct identical amino acid sequence and equal length to YHJS_ECOLI SW: P37657 putative protease23691
yhjU0 b3538 o559; 100 pct identical amino acid sequence and equal length to YHJU_ECOLI SW: P37659 orf, hypothetical protein
yhjT+ b3537 o62 orf, hypothetical protein
638 helD+ b0962 o684; 98 pct identical to HELD_ECOLI SW: P15038 DNA helicase IV7101
2829 yjjW0 b4379 f287; 100 pct identical amino acid sequence and equal length to YJJW_ECOLI SW: P39409 putative activating enzyme29981
yjjI+ b4380 f516; 100 pct identical amino acid sequence and equal length to YJJI_ECOLI SW: P37342 orf, hypothetical protein
2254 yhjR0 b3535 f62 orf, hypothetical protein23681
yhjM+ b3531 f368; 100 pct identical amino acid sequence and equal length to YHJM_ECOLI SW: P37651 putative endoglucanase
yhjO0 b3533 f888; sequence change joins ORFs yhjP and yhjO fromearlier version (YHJO_ECOLI SW: P37653) putative cellulose synthase
yhjL0 b3530 f1166; 100 pct identical to 1139 amino acids of YHJL_ECOLI SW: P37650 but has 26 additional N-ter residues putative oxidoreductase subunit
yhjN+ b3532 f779; 99 pct identical amino acid sequence and equal length to YHJN_ECOLI SW: P37652 orf, hypothetical protein
yhjQ0 b3534 f242b orf, hypothetical protein
219 prpC0 b0333 o389; 37 pct identical (2 gaps) to 377 residues of approx. 376 aa protein CISY_MYCSM SW: P26491 putative citrate synthase; propionate metabolism?2381
prpE+ b0335 o628; 40 pct identical (25 gaps) to 612 residues of approx. 664 aa protein ACSA_ALCEU SW: P31638 putative propionyl-CoA synthetase
prpD0 b0334 o483; 70 pct identical to 177 residues of approx.184 aa protein MMGE_BACSU SW: P45859 orf, hypothetical protein
1649 hmpA+ b2552 o396; 100 pct identical to HMPA_ECOLI SW: P24232 dihydropteridine reductase, ferrisiderophore reductase activity17011

 [top] Directly PhoP regulated in E. coli and no PhoP motif found in S. typhimurium
OperonIDgeneexpressionfunctionOrthologsmotif
2518 metB0 b3939 o386; CG Site No. 515 cystathionine gamma-synthase26810
metL+ b3940 o810; 100 pct identical to AK2H_ECOLI SW: P00562;bifunctional enzyme; CG Site No. 506 aspartokinase II and homoserine dehydrogenase II
1523 fadL+ b2344 o448; 99 pct identical to FADL_ECOLI SW: P10384 transport of long-chain fatty acids; sensitivity to phage T215860
764 ycgK+ b1178 f133; This 133 aa ORF is 22 pct identical (2 gaps) to 81 residues of an approx. 232 aa protein YRAI_ECOLI SW: P42914 orf, hypothetical protein17280
429 ybeQ+ b0644 f327; This 327 aa ORF is 31 pct identical (15 gaps) to 257 residues of an approx. 704 aa protein SKT5_YEAST SW: P34226 orf, hypothetical protein4350
2145 argD+ b3359 f406; CG Site No. 1018; alternate names argG, Arg1;100 pct identical amino acid sequence and equal length to ARGD_ECOLI SW: P18335 acetylornithine delta-aminotransferase22610
2589 malM+ b4037 o306; CG Site No. 18178; alternate gene name molA periplasmic protein of mal regulon27650
24 yaaF+ b0030 o304; 100 pct identical to YAAF_ECOLI SW: P22564 orf, hypothetical protein360
516 uvrB+ b0779 o673; 100 pct identical to UVRB_ECOLI SW: P07025 DNA repair; excision nuclease subunit B5240
2057 nlp+ b3188 o92; 100 pct identical amino acid sequence and equal length to NLP_ECOLI SW: P18837 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu21730
483 sucC+ b0728 o388; 100 pct identical to SUCC_ECOLI SW: P07460 succinyl-CoA synthetase, beta subunit4870
sucD+ b0729 o289; 100 pct identical to SUCD_ECOLI SW: P07459 succinyl-CoA synthetase, alpha subunit
2557 yjaD0 b3996 o257; 100 pct identical amino acid sequence and equal length to YJAD_ECOLI SW: P32664 orf, hypothetical protein27270
nfi+ b3998 o225; formerly designated yjaF endonuclease V (deoxyinosine 3endoduclease)
hemE0 b3997 o354; 100 pct identical to DCUP_ECOLI SW: P29680; CG Site No. 644 uroporphyrinogen decarboxylase
1596 eutJ0 b2454 f278; 89 pct identical (1 gap) to EUTJ_SALTY SW:P41794 (279 aa) ethanolamine utilization; homolog of Salmonella gene16370
eutE0 b2455 f467; 93 pct identical to EUTE_SALTY SW: P41793 ethanolamine utilization; similar to acetaldehyde dehydrogenase
cchB0 b2456 f95; 91 pct identical to 95 residues of CCHB_SALTYSW: P41792 (99 aa) detox protein
eutG+ b2453 f404; 80 pct identical (4 gaps) to 394 residues ofEUTG_SALTY SW: P41795 (391 aa) ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase
2282 malS+ b3571 o676; 100 pct identical to AMY1_ECOLI SW: P25718; CG Site No. 17659 alpha-amylase24010
2562 purD+ b4005 f429; 100 pct identical to PUR2_ECOLI SW: P15640; CG Site No. 342 phosphoribosylglycinamide synthetase = GAR synthetase27320
purH0 b4006 f529; 100 pct identical to PUR9_ECOLI SW: P15639; CG Site No. 338
1174 yeaD+ b1780 o301; This 301 aa ORF is 42 pct identical (38 gaps) to 230 residues of an approx. 272 aa protein YD17_HAEIN SW: P44160 orf, hypothetical protein8610
1440 napC0 b2202 f200; 100 pct identical to NAPC_ECOLI SW: P33932 cytochrome c-type protein15030
napH0 b2204 f287; 100 pct identical to NAPH_ECOLI SW: P33934 ferredoxin-type protein: electron transfer
napG0 b2205 f231; 100 pct identical to NAPG_ECOLI SW: P33936 ferredoxin-type protein: electron transfer
napA0 b2206 f828; 99 pct identical to 801 residues of a 809 aa protein NAPA_ECOLI SW: P33937 but differs at N-term probable nitrate reductase 3
napD+ b2207 f87; formerly designated yojF orf, hypothetical protein
napF0 b2208 f164; 100 pct identical to NAPF_ECOLI SW: P33939 ferredoxin-type protein: electron transfer
napB0 b2203 f156; 100 pct identical to 133 residues ofNAPB_ECOLI SW: P33933 (169 aa) but differs at C-term cytochrome c-type protein
ccmB0 b2200 f220; 100 pct identical to CCMB_ECOLI SW: P33930 heme exporter protein B, cytochrome c-type biogenesis protein
ccmA0 b2201 f205; 100 pct identical to CCMA_ECOLI SW: P33931 ATP binding protein of heme exporter A
387 ybdK+ b0581 f372; This 372 aa ORF is 26 pct identical (3 gaps) to 100 residues of an approx. 1168 aa protein GAP1_DROME SW: P48423 orf, hypothetical protein3920

 [top] Directly PhoP regulated in E. coli and PhoP motif found in S. typhimurium
OperonIDgeneexpressionfunctionOrthologsmotif
1059 rstA+ b1608 o242; 100 pct identical to GB: ECU41101_1 ACCESSION:U41101; alternate name urpT; GTG start response transcriptional regulatory protein (RstB sensor)9871
rstB+ b1609 o433; 100 pct identical to fragment USPT_ECOLI SW:P18392 (183 aa) but contains 250 additional N-term residues; alternate name uspT; RstB sensor histidine protein kinase (RstA regulator)
273 ybaD+ b0413 o149; 100 pct identical to YBAD_ECOLI SW: P25538 orf, hypothetical protein2751
ribD+ b0414 o367; 100 pct identical to RIBG_ECOLI SW: P25539; alternate gene name ribG bifunctional pyrimidine deaminase*reductase in pathway of riboflavin synthesis
308 acrA+ b0463 f397; 100 pct identical to ACRA_ECOLI SW: P31223 acridine efflux pump3191
acrB+ b0462 f1049; 100 pct identical to ACRB_ECOLI SW: P31224 acridine efflux pump
2065 yrbL+ b3207 o210 orf, hypothetical protein21811