Table 2: Details on the chosen set of clusters for each benchmark data set.

(a) Name of benchmark data set; (b) similarity parameter and (c) inflation value parameter used to generate these set of clusters; (d) number of clusters in the chosen set and (e) the number of subsequences in the largest cluster.
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Gene (a)

P (b)

I (c)

# clusters (d)

# el largest cluster (e)

cfos

0

4

12

5

hoxb2

-10

4

4

6

pax6

0

4

20

6

scl

-10

4

11

4

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