Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
110
4
7
0.91276
1
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_94.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 1 110 4 7 0.91276 1 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| ArcA: negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b0313 (betI) | Seed | BetI transcriptional repressor | ArcA | - | TCCCCACTGTTATTGTTACTATTTAAAATCAAATTCGTAACAATTAAGACACATTTTATATT |
| b1109 (ndh) | Seed | NADH dehydrogenase II | ArcA | + | TTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGG |
| b3908 (sodA) | Seed | SodA | ArcA | - | ACGGCATTGATAATCATTTTCAATATCATTTAATTAACTATAATGAACCAACTGCTTACGCG |
| b2518 (ndk) | Seed | Ndk | | TTGTTGCTAAAACTCATTTTATTTTAAAAAAATGTTACCTTCATCAATAGTCAACGGCCCTG | |
| b0429 (cyoD) | Extension | cytochrome bo terminal oxidase subunit IV | | - | |
| b0430 (cyoC) | Extension | cytochrome bo terminal oxidase subunit III | | - | |
| b0432 (cyoA) | Extension | cytochrome bo terminal oxidase subunit II | ArcA | - | TCACCCAGTTGTCACTCTAATGATAATTATTTGTTAAATAATTGTTTTATTTCACATTGGTT |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_94.png){kind=link}