Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
82
4
9
0.79337
1
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_71.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 2 82 4 9 0.79337 1 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| Fur: negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer |  |  |
| CRP: cyclic AMP receptor protein |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b0683 (fur) | Seed | Fur | Fur CRP | - + | ATGATACGCATTATCT AAATGTAAGCTGTGCCACGTTTT |
| b0593 (entC) | Seed | isochorismate synthase 1 | Fur CRP | - + | ATGATAATCATTATTA AACGGCGCAGGACATCACATTGC |
| b0805 (fiu) | Seed | putative outer membrane receptor for iron transport | Fur CRP | - + | ATCAAAATTATTATCA AATTATTATCACTTTCACGAGCA |
| b0584 (fepA) | Seed | FepA, outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D | Fur CRP | - + | TTGATAACTATTTGCA TACTGTGCAATTTTTCATTGATT |
| b0594 (entE) | Extension | EntE | | - + | |
| b0583 (entD) | Extension | | - + | | |
| b0592 (fepB) | Extension | FepB | Fur | - | ATGAGAAGCATTATTG GATTGTGCGCTTTGTCGAATTTG |
| b0596 (entA) | Extension | EntA | | - + | |
| b2155 (cirA) | Extension | outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product | Fur | - + | TTGATAATTGTTATCG AGATGTGAGCGATAACCCATTTT |
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