Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 1 60 6 22 0.89842 0 | ![]() [View full size image] | ![]() [View full size image] |
Motif | Motif logo | Module motif logo |
---|---|---|
Fur: negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer | ![]() | ![]() |
Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
---|---|---|---|---|---|
b3006 (exbB) | Seed | ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins | Fur | - | ATGAGAACGACTATCA |
b2673 (nrdH) | Seed | glutaredoxin-like protein | Fur | - | ATGCGCATTACTATTT |
b2392 (mntH) | Seed | MntH manganese ion NRAMP transporter |    | - | TTGATAATCATTCTCG |
b4367 (fhuF) | Seed | acts in reduction of ferrioxamine B iron | Fur | - | ATGATAATTTTTATCA |
b1684 (sufA) | Seed | Fe-S cluster assembly protein | Fur | - | CTGATAATCATTATCA |
b0755 (gpmA) | Seed | phosphoglyceromutase 1 monomer | Fur | - | ATGAGAATTATTATCA |
b4293 (fecI) | Extension | RNA polymerase, sigma 19 factor | Fur | - | ATGATAACCATTCTCA |
b1452 (yncE) | Extension | conserved protein |    | ATGATTACGCTTAGCG | |
b1679 (sufE) | Extension | sulfur acceptor that activates SufS cysteine desulfurase |    | - |    |
b1252 (tonB) | Extension | TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins | Fur | +- | ATGATTGCTATTTGCA |
b0592 (fepB) | Extension | FepB | Fur | - | ATGAGAAGCATTATTG |
b3005 (exbD) | Extension | ExbD uptake of enterochelin; tonB-dependent uptake of B colicins | Fur | - | ATGGCAATGCATCTTA |
b3337 (bfd) | Extension | bacterioferritin-associated ferredoxin |    | ATAAGAACTATTTTCA | |
b2674 (nrdI) | Extension | conserved protein that may stimulate ribonucleotide reductase |    | - |    |
b1683 (sufB) | Extension | component of SufB-SufC-SufD cysteine desulfurase (SufS) activator complex |    | - |    |
b1681 (sufD) | Extension | component of SufB-SufC-SufD cysteine desulfurase (SufS) activator complex |    | - |    |
b2675 (nrdE) | Extension | NrdE |    | - | ACGCAAAGCGATATCG |
b0584 (fepA) | Extension | FepA, outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D | Fur | - | TTGATAACTATTTGCA |
b1680 (sufS) | Extension | L-selenocysteine lyase (and L-cysteine desulfurase) monomer |    | - |    |
b1682 (sufC) | Extension | component of SufBCD complex |    | - |    |
b2676 (nrdF) | Extension | NrdF |    | - |    |
b0468 (ybaN) | Extension | conserved inner membrane protein |    | ATGATAATTGTTATGC |