Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
82
4
4
0.93772
0
[View full size image]
![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_56.png){kind=link}
[View full size image]
| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 2 82 4 4 0.93772 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| Fis: Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters |  |  |
| CRP: cyclic AMP receptor protein |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b3073 (ygjG) | Seed | b3073 | Fis | +- | TCTTGCCCAAAAATCAGGCAAT TAATTTGATTTAGATCGCAATTT |
| b0116 (lpd) | Seed | E3 monomer | Fis CRP | + +- | TGTTGTTTAAAAATTGTTAACA AATTGTTAACAATTTTGTAAAAT |
| b0118 (acnB) | Seed | b0118 | Fis CRP | - + | GGTAGTTTAAATTTTGACTAAT TTTTGTAAACAGATTAACACCTC |
| b4111 (proP) | Seed | ProP proline/betaine MFS transporter | Fis CRP | + +- | AAAAGGTCATTAACTGCCCAAT ATGTGTGAAGTTGATCACAAATT |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_56.png){kind=link}