Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
80
4
4
0.92539
0
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_4.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 2 80 4 4 0.92539 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| SoxS: regulation of superoxide response regulon |  |  |
| MarA: multiple antibiotic resistance; transcriptional activator of defense systems |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b0871 (poxB) | Seed | pyruvate oxidase monomer | SoxS MarA | + + | TTAACCGTTAGTGCCTCCT ACCGTTAGTGCCTCCTTTCTCT |
| b3924 (fpr) | Seed | b3924 | SoxS MarA | + + | TTGATCGATTGAGCCTTCC TTGATCGATTGAGCCTTCCAGT |
| b3908 (sodA) | Seed | SodA | SoxS MarA | + + | AAAGTACGGCATTGATAAT ACGAAAAGTACGGCATTGATAA |
| b2237 (inaA) | Seed | pH-inducible protein involved in stress response | SoxS MarA | + + | TTAATACGACACGTTTCAT TTCATTAATACGACACGTTTCA |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_4.png){kind=link}