Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
98
5
11
0.87808
0
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_45.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 1 98 5 11 0.87808 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| FNR: transcriptional regulation of aerobic, anaerobic respiration, osmotic balance |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b1541 (ydfZ) | Seed | conserved protein | | CTTGATCAAAAACAA | |
| b0894 (dmsA) | Seed | dimethyl sulfoxide reductase, chain A | FNR | + | TTTGATACCGAACAA |
| b1256 (ompW) | Seed | OmpW, outer membrane protein | | + | ATTGATTTAAATCAC |
| b2727 (hypB) | Seed | accessory protein for nickel incorporation into hydrogenase isoenzymes | FNR | + | AGTGAGCGATGTGTA |
| b4238 (nrdD) | Seed | ribonucleoside-triphosphate reductase | FNR | + | TTTGAGCTACATCAA |
| b1593 (ynfK) | Extension | hypothetical protein | | TTTGCGCTATCTCAA | |
| b4380 (yjjI) | Extension | conserved hypothetical protein | | TTCGATACACATCAC | |
| b2726 (hypA) | Extension | accessory protein for nickel incorporation into hydrogenase 3 | | | |
| b2729 (hypD) | Extension | protein involved in maturation of hydrogenase isoenzymes | | + | GTTGATGAATATCGC |
| b2728 (hypC) | Extension | protein involved in hydrogenase 3 maturation | | + | |
| b0895 (dmsB) | Extension | dimethyl sulfoxide reductase, chain B | | + | |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_45.png){kind=link}