Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 1 49 8 32 0.86248 0 | ![]() [View full size image] | ![]() [View full size image] |
Motif | Motif logo | Module motif logo |
---|---|---|
FlhDC: | ![]() | ![]() |
Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
---|---|---|---|---|---|
b1073 (flgB) | Seed | flagellar basal-body rod protein FlgB | FlhDC | + | TATTCCGCCGATAACGC |
b1072 (flgA) | Seed | flagellar biosynthesis; assembly of basal-body periplasmic P ring | FlhDC | + | TTATCGGCGGAATAAAC |
b1924 (fliD) | Seed | flagellar cap protein FliD; filament capping protein; enables filament assembly | FlhDC | + | TTAGTCGCCGAAATACT |
b1904 (yecR) | Seed | predicted protein | FlhDC | + | TTTCCGGCCATTGTCGC |
b1944 (fliL) | Seed | flagellar biosynthesis | FlhDC | + | TTTCCCCGCTTTGTTGC |
b1938 (fliF) | Seed | flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein | FlhDC | + | CAAAGGCGCTAAATAGC |
b1880 (flhB) | Seed | flagellar biosynthesis protein FlhB | FlhDC | + | CAAAAGCCCTAAATCCC |
b1922 (fliA) | Seed | RNA polymerase, sigma 28 (sigma F) factor | FlhDC | + | TGTAACCCCCAAATAAC |
b1945 (fliM) | Extension | flagellar motor switch protein FliM |    | + | TTATTCTGCGATAACGA |
b1948 (fliP) | Extension | flagellar biosynthesis protein FliP |    | + |    |
b1080 (flgI) | Extension | flagellar P-ring protein FlgI |    | + |    |
b1071 (flgM) | Extension | anti-sigma factor for FliA (sigma 28) |    | + |    |
b1940 (fliH) | Extension | flagellar biosynthesis protein FliH |    | + |    |
b1926 (fliT) | Extension | flagellar biosynthesis protein FliT |    | + | TTAATGCGCAATATTGC |
b1939 (fliG) | Extension | flagellar motor switch protein FliG |    | + |    |
b1947 (fliO) | Extension | flagellar biosynthesis protein FliO |    | + |    |
b1077 (flgF) | Extension | flagellar basal-body rod protein FlgF |    | + |    |
b1943 (fliK) | Extension | flagellar hook-length control protein FliK |    | + | TTAGCGCCCTTGATTAC |
b1925 (fliS) | Extension | flagellar biosynthesis protein FliS |    | + |    |
b1076 (flgE) | Extension | flagellar hook protein FlgE |    | + |    |
b1946 (fliN) | Extension | flagellar motor switch protein FliN |    | + |    |
b1079 (flgH) | Extension | flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein |    | + |    |
b1075 (flgD) | Extension | flagellar biosynthesis, initiation of hook assembly |    | + |    |
b1070 (flgN) | Extension | flagellar biosynthesis protein FlgN |    | + |    |
b1074 (flgC) | Extension | flagellar basal-body rod protein FlgC |    | + |    |
b1078 (flgG) | Extension | flagellar basal-body rod protein FlgG |    | + | TGTAGGCCGGATAAGGC |
b1921 (fliZ) | Extension | predicted regulator of FliA activity |    | + |    |
b1081 (flgJ) | Extension | FlgJ |    | + |    |
b1879 (flhA) | Extension | flagellar biosynthesis protein FlhA |    | + |    |
b1942 (fliJ) | Extension | flagellar biosynthesis protein FliJ |    | + |    |
b1949 (fliQ) | Extension | flagellar biosynthesis protein FliQ |    | + |    |
b1937 (fliE) | Extension | flagellar basal-body protein FliE | FlhDC | + | CTATCCGCCAATAAACC |