Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
61
4
4
0.93764
0
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_30.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 2 61 4 4 0.93764 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| Fis: Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters |  |  |
| CRP: cyclic AMP receptor protein |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b0118 (acnB) | Seed | b0118 | Fis CRP | - + | GGTAGTTTAAATTTTGACTAAT TTTTGTAAACAGATTAACACCTC |
| b4069 (acs) | Seed | b4069 | Fis CRP | - + | TGTCGCCCAAATACTAAACAAA TTGCGTGATCTGTCGCCCAAATA |
| b4355 (tsr) | Seed | Tsr | | TATTGATTAATAGTTGGCCGAA ATATGTGATTCATATCACATATT | |
| b3072 (aer) | Seed | aerotaxis sensor receptor, flavoprotein | | AATTGCCTGATTTTTGGGCAAG AATTGCGATCTAAATCAAATTAA |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_30.png){kind=link}