Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
111
4
5
0.9267
0
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_17.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 2 111 4 5 0.9267 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| ArcA: negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) |  |  |
| FNR: transcriptional regulation of aerobic, anaerobic respiration, osmotic balance |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b1324 (tpx) | Seed | thiol peroxidase 2 | ArcA FNR | - - | TGCGGATTAAGCGCAAATAGCGTTTGCTGTGTTATTGACAGTTAGCATAAACTAGGTGTGAC ATTGACAGTTAGCAT |
| b1415 (aldA) | Seed | AldA | ArcA FNR | - - | TCCGTCTCTCTGATGATTGATGTTAATTAACAATGTATTCACCGAAAACAAACATATAAATC ATTGATGTTAATTAA |
| b0432 (cyoA) | Seed | cytochrome bo terminal oxidase subunit II | ArcA FNR | - - | TCACCCAGTTGTCACTCTAATGATAATTATTTGTTAAATAATTGTTTTATTTCACATTGGTT ATTGTTTTATTTCAC |
| b2288 (nuoA) | Seed | NuoA | ArcA FNR | - - | AGGGCATTAAATGCTAATGGTGTTGATATTATGTAAACTAATGTGAAGAAACTTTTGTTAAA CGTGTCACAGATCAA |
| b0431 (cyoB) | Extension | cytochrome bo terminal oxidase subunit I | | - - | |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_17.png){kind=link}