Module 136

Number of motifs
Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
=
1
54
5
18
0.87129
3

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Additional motif analysis

Motif information

MotifMotif logoModule motif logo
CRP:
cyclic AMP receptor protein




Gene information

GeneSeed/Extended SeedDescriptionDirect interaction (RegulonDB)Indirect interaction (RegulonDB)Motif instance
b4299 (yjhI)Seed KpLE2 phage-like element; predicted DNA-binding transcriptional regulator  



AAGTGTGTACAAGATCACATTTA

b2869 (ygeV)Seed putative transcriptional regulator  



ATGTGTGGGGTTGATCACAAATT

b0064 (araC)Seed AraCCRP

+

AAGTGTGACGCCGTGCAAATAAT

b2702 (srlA)Seed glucitol/sorbitol-specific enzyme IIC component of PTS  

+

TTTTGCGATCAAAATAACACTTT

b2146 (yeiT)Seed predicted oxidoreductase  



ATTTGTGAATCTTTTCACAGTTT

b2800 (fucA)Extension   

+

TTAGTTGAACCAGGTCACAAAAT

b2147 (yeiA)Extension predicted oxidoreductase  



  

b4216 (ytfJ)Extension conserved protein  



ATTTGTGCGCTTGACCGCAAACT

b1901 (araF)Extension AraFCRP

+

TTTTGCGAGATGGCTCTCATTAT

b1976 (mtfA)Extension Mlc titration factor  



TCAAGTGCTGAATGTCACAGTAT

b3566 (xylF)Extension XylFCRP

+

AAGTGTGCGCTCGCTCGCAAAAT

b2964 (nupG)Extension NupG nucleoside MFS transporterCRP

+-

AAATGTTATCCACATCACAATTT

b0598 (cstA)Extension peptide transporter induced by carbon starvationCRP

+

CGGAGTGATCGAGTTAACATTGT

b2705 (srlD)Extension SrlD  

+

  

b0880 (cspD)Extension DNA replication inhibitor  



TAGCGTTAACTGCTTCAAATTTT

b3403 (pck)Extension   



GAATGCGATTCCACTCACAATAT

b1002 (agp)Extension Agp  

+

CATTGTTATTAGTCTCACACTTT

b4227 (ytfQ)Extension YtfQ  



AAGTGTGATGTAACGCAATCTGT