Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
127
4
4
0.92517
0
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_12.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 2 127 4 4 0.92517 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| CytR: regulator for deo operon, udp, cdd, tsx, nupC, and nupG |  |  |
| CRP: cyclic AMP receptor protein |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b3831 (udp) | Seed | Udp | | - + | GGTGGGTAAATTTATGCAACGCATTTGCGTCATGGTGATGA TTATGTGATTTGCATCACTTTTG |
| b2143 (cdd) | Seed | Cdd | CytR CRP | - +- | GCGTCGCGCATTTTTGATGTATGTTTCACGCGTTGCATAAT TAATGAGATTCAGATCACATATA |
| b2964 (nupG) | Seed | NupG nucleoside MFS transporter | CytR CRP | - +- | TCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAG AAATGTTATCCACATCACAATTT |
| b4381 (deoC) | Seed | b4381 | CytR CRP | - +- | AGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGT AATTGTGATGTGTATCGAAGTGT |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_12.png){kind=link}