Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
32
4
4
0.96055
0
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_128.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 1 32 4 4 0.96055 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| ArcA: negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b4058 (uvrA) | Seed | excision nuclease subunit A | ArcA | - | TTCCAATACTGTATATTCATTCAGGTCAATTTGTGTCATAATTAACCGTTTGTGATCGCCGG |
| b0007 (yaaJ) | Seed | YaaJ alanine AGSS transporter | | AAGTTATCAAGTACCTCGTAGCGTATATACTTCTTAAACAATTGGTAACGTTTACACAGGAA | |
| b0280 (yagN) | Seed | CP4-6 prophage; predicted protein | | TCAAGATAGATTTTCATGTATCGTAATACACAGTTTAGTCAATGATACAGCAACTACACAGG | |
| b1109 (ndh) | Seed | NADH dehydrogenase II | ArcA | + | TTGTTAATTAAGAGCTATGTTAATAACCATTAATTAACAATTGGTTAATAAATTTAAGGGGG |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_128.png){kind=link}