Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
52
7
38
0.87003
5
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_115.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 1 52 7 38 0.87003 5 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| CRP: cyclic AMP receptor protein |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b2535 (csiE) | Seed | stationary phase inducible protein | CRP | + | TTCTGTGACGCTTGCCAACATTT |
| b0064 (araC) | Seed | AraC | CRP | + | AAGTGTGACGCCGTGCAAATAAT |
| b2980 (glcC) | Seed | GlcC transcriptional dual regulator | CRP | + | ATGTTAAATTGATGTAACATAAT |
| b4069 (acs) | Seed | b4069 | CRP | + | TTGCGTGATCTGTCGCCCAAATA |
| b3588 (aldB) | Seed | b3588 | CRP | + | ATTCGTGATAGCTGTCGTAAAGC |
| b2150 (mglB) | Seed | MglB | CRP | + | ATCTGTGAGTGATTTCACAGTAT |
| b2844 (yqeF) | Seed | predicted acyltransferase | | CTTTGTGATAAAAATCACTTTTT | |
| b4216 (ytfJ) | Extension | conserved protein | | ATTTGTGCGCTTGACCGCAAACT | |
| b1391 (paaD) | Extension | putative subunit of phenylacetate-CoA oxygenase | | + | |
| b1513 (lsrA) | Extension | LsrA | | + | ATCTGTGATGGCAACCACAGTTT |
| b4189 (yjfO) | Extension | conserved protein | | TGTTGAGATGTGGGTTACGCTTT | |
| b4119 (melA) | Extension | α-galactosidase monomer | CRP | + | GACTGCGAGTGGGAGCACGGTTT |
| b3453 (ugpB) | Extension | UgpB | | + | ATCCGTGCCCCATCTCCCATTTT |
| b1189 (dadA) | Extension | D-amino acid dehydrogenase, small subunit | CRP | +- | AGATGTGAGCCAGCTCACCATAA |
| b1805 (fadD) | Extension | FadD | CRP | + | AATAGTGACGCGCTTCGCAACCT |
| b2659 (csiD) | Extension | predicted protein | CRP | + | TTTGTTGCTTTTGATCACAATAA |
| b4003 (zraS) | Extension | ZraS | CRP | + | AGATGCGTTTTATGCAACGTTCT |
| b4067 (actP) | Extension | YjcG SSS transporter | | + | |
| b2149 (mglA) | Extension | MglA | | + | |
| b2660 (ygaF) | Extension | predicted enzyme | | + | |
| b1516 (lsrB) | Extension | LsrB | | + | |
| b3927 (glpF) | Extension | GlpF | CRP | + | TTTTATGACGAGGCACACACATT |
| b1415 (aldA) | Extension | AldA | CRP | + | TTTTATGAAGCCCTTCACAGAAT |
| b2151 (galS) | Extension | GalS transcriptional dual regulator | CRP | + | TGCTGTGACTCGATTCACGAAGT |
| b0598 (cstA) | Extension | peptide transporter induced by carbon starvation | CRP | + | CGGAGTGATCGAGTTAACATTGT |
| b1441 (ydcT) | Extension | YdcT | | | |
| b1190 (dadX) | Extension | | +- | | |
| b1397 (paaJ) | Extension | β-ketoadipyl-CoA thiolase | | + | ATTTGTGACGGAATTCGTACGCC |
| b0162 (cdaR) | Extension | CdaR transcriptional activator | | ATCTGTGAACTTCACCACAACTC | |
| b3528 (dctA) | Extension | DctA dicarboxylate DAACS transporter | CRP | + | TTGTGCGAGCCAGCTCAAACTTT |
| b2344 (fadL) | Extension | transport of long-chain fatty acids; sensitivity to phage T2 | CRP | - | ATAAGTGACCGAAATCACACTTA |
| b1002 (agp) | Extension | Agp | | + | CATTGTTATTAGTCTCACACTTT |
| b1398 (paaK) | Extension | phenylacetate-CoA ligase | | + | |
| b1440 (ydcS) | Extension | YdcS | | TAATGCGCGGTAGCTCACAACCT | |
| b2536 (hcaT) | Extension | HcaT MFS transporter | | ACATGCGTCGCGGATCTCAGTTT | |
| b4228 () | Extension | | | ||
| b4485 (ytfR) | Extension | YtfR | | | |
| b4227 (ytfQ) | Extension | YtfQ | | AAGTGTGATGTAACGCAATCTGT |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_115.png){kind=link}