Module 114

Number of motifs
Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
=
1
42
6
54
0.83983
6

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Additional motif analysis

Motif information

MotifMotif logoModule motif logo
CRP:
cyclic AMP receptor protein




Gene information

GeneSeed/Extended SeedDescriptionDirect interaction (RegulonDB)Indirect interaction (RegulonDB)Motif instance
b1805 (fadD)Seed FadDCRP

+

AATAGTGACGCGCTTCGCAACCT

b2659 (csiD)Seed predicted proteinCRP

+

TTTGTTGCTTTTGATCACAATAA

b4035 (malK)Seed MalKCRP

+

TTGTGTGATCTCTGTTACAGAAT

b2151 (galS)Seed GalS transcriptional dual regulatorCRP

+

TGCTGTGACTCGATTCACGAAGT

b0598 (cstA)Seed peptide transporter induced by carbon starvationCRP

+

CGGAGTGATCGAGTTAACATTGT

b4139 (aspA)Seed AspACRP

+

AGCGGTGATCTATTTCACAAATT

b2800 (fucA)Extension   

+

TTAGTTGAACCAGGTCACAAAAT

b4189 (yjfO)Extension conserved protein  



TGTTGAGATGTGGGTTACGCTTT

b3253 (yhdH)Extension predicted oxidoreductase, NAD(P)-binding  



AAATCAGATTTATCTCGCAATTT

b1901 (araF)Extension AraFCRP

+

TTTTGCGAGATGGCTCTCATTAT

b3453 (ugpB)Extension UgpB  

+

ATCCGTGCCCCATCTCCCATTTT

b1976 (mtfA)Extension Mlc titration factor  



TCAAGTGCTGAATGTCACAGTAT

b1189 (dadA)Extension D-amino acid dehydrogenase, small subunitCRP

+-

AGATGTGAGCCAGCTCACCATAA

b3426 (glpD)Extension GlpDCRP

+

TAATGTTATACATATCACTCTAA

b2869 (ygeV)Extension putative transcriptional regulator  



ATGTGTGGGGTTGATCACAAATT

b0064 (araC)Extension AraCCRP

+

AAGTGTGACGCCGTGCAAATAAT

b4003 (zraS)Extension ZraSCRP

+

AGATGCGTTTTATGCAACGTTCT

b2980 (glcC)Extension GlcC transcriptional dual regulatorCRP

+

ATGTTAAATTGATGTAACATAAT

b2149 (mglA)Extension MglA  

+

  

b3751 (rbsB)Extension RbsB  

+

  

b2597 (raiA)Extension stationary phase translation inhibitor and ribosome stability factor  



TTATGAGATTTTCATCACACATT

b0268 (yagE)Extension CP4-6 prophage; predicted lyase/synthase  



ATATGTGATCCAGCTTAAATTTC

b3927 (glpF)Extension GlpF CRP

+

TTTTATGACGAGGCACACACATT

b1415 (aldA)Extension AldACRP

+

TTTTATGAAGCCCTTCACAGAAT

b4036 (lamB)Extension phage lambda receptor protein; maltose high-affinity receptor  

+

  

b3748 (rbsD)Extension D-ribose utilizationCRP

+

CGTTTCGAGGTTGATCACATTTC

b2964 (nupG)Extension NupG nucleoside MFS transporterCRP

+-

AAATGTTATCCACATCACAATTT

b1441 (ydcT)Extension YdcT  



  

b0880 (cspD)Extension DNA replication inhibitor  



TAGCGTTAACTGCTTCAAATTTT

b3403 (pck)Extension   



GAATGCGATTCCACTCACAATAT

b3749 (rbsA)Extension RbsA  

+

  

b1190 (dadX)Extension   

+-

  

b3588 (aldB)Extension CRP

+

ATTCGTGATAGCTGTCGTAAAGC

b2148 (mglC)Extension MglC  

+

  

b2150 (mglB)Extension MglBCRP

+

ATCTGTGAGTGATTTCACAGTAT

b4238 (nrdD)Extension ribonucleoside-triphosphate reductase  



TACTTTGAGCTACATCAAAAAAA

b3418 (malT)Extension MalT transcriptional activatorCRP

+

AATTGTGACACAGTGCAAATTCA

b3882 (yihU)Extension predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain  



AAAAGTGACGGCTGTCAATTTTT

b3528 (dctA)Extension DctA dicarboxylate DAACS transporterCRP

+

TTGTGCGAGCCAGCTCAAACTTT

b3926 (glpK)Extension GlpK  

+

  

b2799 (fucO)Extension propanediol oxidoreductase monomer  

+

  

b4239 (treC)Extension   

+-

  

b1612 (fumA)Extension fumarase A monomerCRP

+

GTGAGAGAACAATGTCAAACAAA

b1002 (agp)Extension Agp  

+

CATTGTTATTAGTCTCACACTTT

b4037 (malM)Extension maltose regulon periplasmic protein  

+

  

b1440 (ydcS)Extension YdcS  



TAATGCGCGGTAGCTCACAACCT

b2536 (hcaT)Extension HcaT MFS transporter  



ACATGCGTCGCGGATCTCAGTTT

b4228 ()Extension  



  

b4485 (ytfR)Extension YtfR  



  

b2844 (yqeF)Extension predicted acyltransferase  



CTTTGTGATAAAAATCACTTTTT

b4240 (treB)Extension TreBCRP

+-

AATTGTGATCTTCGCTGCGTTTC

b3750 (rbsC)Extension RbsC  

+

  

b4227 (ytfQ)Extension YtfQ  



AAGTGTGATGTAACGCAATCTGT

b1900 (araG)Extension AraG  

+