Number of conditions
Number of seed genes
Number of extended seed genes
Correlation extended seed
No. (putative) regulators in module
=
=
=
=
=
91
4
4
0.95028
0
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![[View full size image]](./ExpressionProfiles/ExpressionProfile_seed_module_112.png){kind=link}
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| Number of motifs Number of conditions Number of seed genes Number of extended seed genes Correlation extended seed No. (putative) regulators in module | = = = = = = | 1 91 4 4 0.95028 0 | [View full size image] | [View full size image] |
| Motif | Motif logo | Module motif logo |
|---|---|---|
| Fis: Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters |  |  |
| Gene | Seed/Extended Seed | Description | Direct interaction (RegulonDB) | Indirect interaction (RegulonDB) | Motif instance |
|---|---|---|---|---|---|
| b3699 (gyrB) | Seed | DNA gyrase, subunit B | Fis | - | TGTCGGACGAAAATTCGAAGAT |
| b2821 (ptrA) | Seed | protease III | | TGCTGTATAAAAATTGCGCAAT | |
| b2231 (gyrA) | Seed | DNA gyrase, subunit A | Fis | - | CATTGGATGTGAATAAAGCGTA |
| b0779 (uvrB) | Seed | DNA repair; excision nuclease subunit B | | GATTGACTGCAATTTAACCAAT |
![[View full size image]](./ExpressionProfiles/ExpressionProfile_extend_module_112.png){kind=link}