Extraction of over-represented alleles in Bulk Segregant Analysis

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A tool for processing Next Gen Sequencing data for Bulk Segregant Analysis (BSA) experiments.

Bulk segregant analysis for mapping genomic regions to a phenotype

Hidden Markov Model used to predict loci linked to the phenotype of interest

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    Please cite us:
    Improved linkage analysis of Quantitative Trait Loci using bulk segregants unveils a novel determinant of high ethanol tolerance in yeast
    Jorge Duitama, Aminael Sánchez-Rodríguez, Annelies Goovaerts, et. al. http://www.biomedcentral.com/1471-2164/15/207