THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
| Description | Standalone JAR (local testing) | Stripped JAR (distributed processing) | Last update |
Source code |
Original Source code | Latest version of code on Github | July 15, 2015 |
Cloud algorithm |
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| CloudSpeller (both AF and AB) | CloudSpellerSA | CloudSpeller | February 18, 2014 |
| Example settings file AF | settingsAF | February 18, 2014 | |
| Example settings file AB | settingsAB | February 18, 2014 | |
Post processing |
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Distributed AF Pattern Matcher |
DBPMSA | DBPM | February 18, 2014 |
Distributed AB Pattern Matcher |
DBPMSA | DBPM | February 18, 2014 |
Database Filter (C,F,BLS) |
FilterSA | Filter | February 18, 2014 |
Best K Motifs per Permutation Group |
BestKSA | BestK | February 18, 2014 |
Monocots Datasets |
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Monocots AF Real Dataset |
AF real | February 18, 2014 | |
Monocots AF Shuffled Dataset |
AF shuffled | February 18, 2014 | |
Monocots AB Real Dataset |
AB real | February 18, 2014 | |
Monocots AB Shuffled Dataset |
AB shuffled | February 18, 2014 | |
User manual |
Manual | March 4, 2014 |