#INCLUSive GFF File # #The results in this file are NOT complete as long as there is no END-sign at the bottom of this file! #For each reported motif, the identifiers of similar motifs are listed in order as they have been loaded by MotifRanking and NOT by their absolute similarity to the reported motif. The higher the motif score and the motif count ('==>Total') of a top-ranked motif, the more likely it represents a true motif. We advise a minimal count of 10 similars for a top-ranked motif to be a reliable prediction. If you doubt that top-ranked motifs are truly different, we advise to re-evaluate their (non-)similarity with MotifComparison (using p-BLiC metric). #Please consult the MotifRanking guidelines available on MotifSuite to optimally interpretate below results. 1)box_3_1_wATTCCTACnnnTGTArGA 82.8131 box_5_1_wATTCCTACnnnTGTArGA 82.8131 box_7_1_wATTCCTACnnnTGTArGA 82.8131 box_8_1_wATTCCTACnnnTGTArGA 82.8131 box_10_1_wATTCCTACnnnTGTArGA 82.8131 box_14_1_wATTCCTACnnnTGTArGA 82.8131 box_15_1_wATTCCTACnnnTGTArGA 82.8131 box_16_1_wATTCCTACnnnTGTArGA 82.8131 box_17_1_wATTCCTACnnnTGTArGA 82.8131 box_20_1_wATnCCTACnnnTGTArGA 80.8882 box_22_1_wATTCCTACnnnTGTArGA 82.8131 box_31_1_wATTCCTACnnnTGTArGA 82.8131 box_33_1_wATTCCTACnnnTGTArGA 82.8131 box_43_1_wATnCCTACnnnTGTArGA 80.8882 box_46_1_wATTCCTACnnnTGTArGA 82.8131 box_51_1_wATTCCTACnnnTGTArGA 82.8131 box_59_1_wATTCCTACnnnTGTArGA 82.8131 box_62_1_wATTCCTACnnnTGTArGA 82.8131 box_68_1_wATTCCTACnnnTGTArGA 82.8131 box_70_1_wATTCCTACnnnTGTArGA 82.8131 box_73_1_wATnCCTACnnnTGTArGA 80.8882 box_75_1_wATTCCTACnnnTGTArGA 82.8131 box_78_1_wATTCCTACnnnTGTArGA 82.8131 box_80_1_wATTCCTACnnnTGTArGA 82.8131 box_93_1_wATTCCTACnnnTGTArGA 82.8131 box_95_1_wATTCCTACnnnTGTArGA 82.8131 box_96_1_wATTCCTACnnnTGTArGA 82.8131 box_99_1_wATnCCTACnnnTGTArGA 80.8882 ==> Total: 28 (RR = 28%) 2)box_12_1_AAAkCmnCnnTnnwrTyyn 76.1561 box_29_1_rAAknAyCnkTnCwnTyns 68.7738 box_42_1_nAAkmmwnrGTnynnTnny 58.7507 box_58_1_nwAAAkCmnCnnTnnwrTy 75.8436 ==> Total: 4 (RR = 4%) 3)box_27_1_AnTmAskrwTTnyAyCGwT 75.5891 box_36_1_AnTmAskrwTTnyAyCGwT 75.5891 box_37_1_AATnAskrwTTnTAnyGwT 72.6158 box_39_1_AATnAskrwTTnTAnyGwT 72.6158 box_54_1_AATnAskrwTTnTAnyGwT 72.6158 box_74_1_AATnAskrwTTnTAnyGwT 72.6158 ==> Total: 6 (RR = 6%) 4)box_41_1_yAGTnnyAwCnTsrAwmTA 72.4115 box_9_1_GATTTnTArTknCAwsyTs 71.151 box_13_1_GAnTTwTnrTknyAwsyks 69.775 box_25_1_CwTsrmAnTATwArwywTm 61.8022 box_30_1_TAnwknnAAnTwsnmAnTA 65.5661 box_45_1_TAnTknCAwCnnsnnAmTA 67.7309 box_76_1_TAnTknCAwCnnsnnAmTA 67.7309 box_91_1_TAnwknnAAnTwsnmAnTA 65.5661 box_92_1_TArwkynnACwTsrnnnTA 67.6072 ==> Total: 9 (RR = 9%) 5)box_23_1_TCATCrrTAyAATmnATGA 71.3472 box_1_1_wCwTCkwTnnAATmnnTnA 65.2655 box_4_1_wCATCrrTAnAATmymTnA 69.8803 box_21_1_TCwTCrrTnTnATmnATkA 70.169 box_35_1_TCATCrATATAATmnATGA 70.0067 box_47_1_TCATCrATATAATmnATGA 70.0067 box_48_1_wCATCrrTAnAATmymTnA 69.8803 box_49_1_TCATmrATAnAATmwmTnA 69.6651 box_55_1_TCATCrATwTnATmynTkA 68.7573 box_65_1_TmAwCrAyATAmTAwmwGA 67.6878 box_67_1_wCATCrrTAnAATmymTnA 69.8803 box_69_1_TnAwCrATATwnTAmmTkA 61.4131 box_79_1_TCwTCrrTnTnATmnATkA 70.169 box_82_1_TCATCrrTAyAATmnATGA 71.3472 ==> Total: 14 (RR = 14%) #END - Application ends.